Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 SLC25A39P2-201ENST00000537614 270 ntBASIC15.27■□□□□ 0.04
TRA2BP62995 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.27■□□□□ 0.04
TRA2BP62995 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRA2BP62995 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.27■□□□□ 0.04
TRA2BP62995 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.27■□□□□ 0.04
TRA2BP62995 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.27■□□□□ 0.04
TRA2BP62995 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRA2BP62995 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRA2BP62995 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TRA2BP62995 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.27■□□□□ 0.03
TRA2BP62995 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TRA2BP62995 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRA2BP62995 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRA2BP62995 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRA2BP62995 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.27■□□□□ 0.03
TRA2BP62995 AP3S2-216ENST00000617003 1561 ntBASIC15.27■□□□□ 0.03
TRA2BP62995 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRA2BP62995 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
TRA2BP62995 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRA2BP62995 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRA2BP62995 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRA2BP62995 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRA2BP62995 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRA2BP62995 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.26■□□□□ 0.03
TRA2BP62995 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRA2BP62995 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRA2BP62995 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRA2BP62995 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 BX842568.4-201ENST00000421222 227 ntBASIC15.26■□□□□ 0.03
TRA2BP62995 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
TRA2BP62995 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.26■□□□□ 0.03
TRA2BP62995 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.26■□□□□ 0.03
TRA2BP62995 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.26■□□□□ 0.03
TRA2BP62995 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.26■□□□□ 0.03
TRA2BP62995 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.26■□□□□ 0.03
TRA2BP62995 RARRES2P9-201ENST00000565168 469 ntBASIC15.26■□□□□ 0.03
TRA2BP62995 MIR4469-201ENST00000583919 79 ntBASIC15.26■□□□□ 0.03
TRA2BP62995 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.26■□□□□ 0.03
TRA2BP62995 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.26■□□□□ 0.03
TRA2BP62995 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.26■□□□□ 0.03
TRA2BP62995 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.26■□□□□ 0.03
TRA2BP62995 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.26■□□□□ 0.03
TRA2BP62995 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TRA2BP62995 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.26■□□□□ 0.03
TRA2BP62995 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TRA2BP62995 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.26■□□□□ 0.03
TRA2BP62995 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.26■□□□□ 0.03
TRA2BP62995 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRA2BP62995 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.26■□□□□ 0.03
TRA2BP62995 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRA2BP62995 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.26■□□□□ 0.03
TRA2BP62995 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRA2BP62995 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.25■□□□□ 0.03
TRA2BP62995 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.25■□□□□ 0.03
TRA2BP62995 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
TRA2BP62995 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRA2BP62995 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRA2BP62995 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRA2BP62995 RPSAP43-201ENST00000402237 625 ntBASIC15.25■□□□□ 0.03
TRA2BP62995 UPF3AP3-201ENST00000420996 769 ntBASIC15.25■□□□□ 0.03
TRA2BP62995 AC005237.2-201ENST00000434368 219 ntBASIC15.25■□□□□ 0.03
TRA2BP62995 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.25■□□□□ 0.03
TRA2BP62995 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRA2BP62995 AC112482.1-201ENST00000492080 688 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms