Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
AP1S1P61966 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S1P61966 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
AP1S1P61966 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP1S1P61966 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.28■□□□□ 0.2
AP1S1P61966 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.27■□□□□ 0.2
AP1S1P61966 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.27■□□□□ 0.2
AP1S1P61966 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 FO538757.1-201ENST00000623083 1397 ntBASIC16.27■□□□□ 0.2
AP1S1P61966 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.27■□□□□ 0.2
AP1S1P61966 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
AP1S1P61966 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.27■□□□□ 0.2
AP1S1P61966 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
AP1S1P61966 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.27■□□□□ 0.2
AP1S1P61966 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.27■□□□□ 0.2
AP1S1P61966 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.27■□□□□ 0.2
AP1S1P61966 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.27■□□□□ 0.2
AP1S1P61966 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.27■□□□□ 0.2
AP1S1P61966 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
AP1S1P61966 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
AP1S1P61966 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP1S1P61966 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
AP1S1P61966 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S1P61966 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
AP1S1P61966 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S1P61966 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
AP1S1P61966 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S1P61966 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
AP1S1P61966 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S1P61966 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S1P61966 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.27■□□□□ 0.19
AP1S1P61966 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
AP1S1P61966 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP1S1P61966 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.27■□□□□ 0.19
AP1S1P61966 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.26■□□□□ 0.19
AP1S1P61966 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S1P61966 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S1P61966 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 PCDH8P1-201ENST00000428983 2773 ntBASIC16.26■□□□□ 0.19
AP1S1P61966 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
AP1S1P61966 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S1P61966 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 TREML5P-201ENST00000421694 576 ntBASIC16.26■□□□□ 0.19
AP1S1P61966 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.26■□□□□ 0.19
AP1S1P61966 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S1P61966 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.26■□□□□ 0.19
AP1S1P61966 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.26■□□□□ 0.19
AP1S1P61966 AL138828.2-201ENST00000615812 383 ntBASIC16.26■□□□□ 0.19
AP1S1P61966 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP1S1P61966 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
AP1S1P61966 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S1P61966 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.26■□□□□ 0.19
AP1S1P61966 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.26■□□□□ 0.19
AP1S1P61966 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP1S1P61966 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP1S1P61966 KRT8P12-202ENST00000472924 1397 ntBASIC16.26■□□□□ 0.19
AP1S1P61966 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms