Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.98□□□□□ -0.17
AP3S2P59780 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AP3S2P59780 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP3S2P59780 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
AP3S2P59780 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
AP3S2P59780 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.97□□□□□ -0.17
AP3S2P59780 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 C8orf49-201ENST00000525043 1968 ntBASIC13.97□□□□□ -0.17
AP3S2P59780 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
AP3S2P59780 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
AP3S2P59780 LINC00982-205ENST00000420957 435 ntBASIC13.97□□□□□ -0.17
AP3S2P59780 AL158047.1-201ENST00000445918 881 ntBASIC13.97□□□□□ -0.17
AP3S2P59780 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 AC011467.2-201ENST00000598425 242 ntBASIC13.97□□□□□ -0.17
AP3S2P59780 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AP3S2P59780 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
AP3S2P59780 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
AP3S2P59780 AC232323.1-201ENST00000540724 2099 ntBASIC13.97□□□□□ -0.17
AP3S2P59780 REXO1L5P-201ENST00000622260 2098 ntBASIC13.97□□□□□ -0.17
AP3S2P59780 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 AC013726.1-201ENST00000563747 2285 ntBASIC13.97□□□□□ -0.17
AP3S2P59780 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.97□□□□□ -0.17
AP3S2P59780 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AP3S2P59780 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.97□□□□□ -0.17
AP3S2P59780 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP3S2P59780 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.96□□□□□ -0.17
AP3S2P59780 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
AP3S2P59780 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.96□□□□□ -0.17
AP3S2P59780 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.96□□□□□ -0.17
AP3S2P59780 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.96□□□□□ -0.17
AP3S2P59780 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP3S2P59780 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.96□□□□□ -0.17
AP3S2P59780 AC091167.2-201ENST00000579581 588 ntBASIC13.96□□□□□ -0.17
AP3S2P59780 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.96□□□□□ -0.17
AP3S2P59780 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.96□□□□□ -0.17
AP3S2P59780 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms