Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP4BP1P59074 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP4BP1P59074 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 AP3S2-216ENST00000617003 1561 ntBASIC18.55■□□□□ 0.56
CHMP4BP1P59074 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.55■□□□□ 0.56
CHMP4BP1P59074 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 AC018529.1-201ENST00000613063 361 ntBASIC18.55■□□□□ 0.56
CHMP4BP1P59074 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 AL671710.1-201ENST00000610245 2349 ntBASIC18.55■□□□□ 0.56
CHMP4BP1P59074 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP4BP1P59074 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP4BP1P59074 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms