Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLRN1P58418 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.52□□□□□ -0.09
CLRN1P58418 AL671277.1-201ENST00000429656 993 ntBASIC14.52□□□□□ -0.09
CLRN1P58418 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.52□□□□□ -0.09
CLRN1P58418 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.52□□□□□ -0.09
CLRN1P58418 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.52□□□□□ -0.09
CLRN1P58418 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.52□□□□□ -0.09
CLRN1P58418 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 AL365330.1-201ENST00000607459 531 ntBASIC14.52□□□□□ -0.09
CLRN1P58418 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.52□□□□□ -0.09
CLRN1P58418 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.52□□□□□ -0.09
CLRN1P58418 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CLRN1P58418 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.52□□□□□ -0.09
CLRN1P58418 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLRN1P58418 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.52□□□□□ -0.09
CLRN1P58418 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.52□□□□□ -0.09
CLRN1P58418 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.52□□□□□ -0.09
CLRN1P58418 AC024909.3-201ENST00000611513 2257 ntBASIC14.52□□□□□ -0.09
CLRN1P58418 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLRN1P58418 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.51□□□□□ -0.09
CLRN1P58418 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 AKAP8P1-201ENST00000434743 1349 ntBASIC14.51□□□□□ -0.09
CLRN1P58418 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CLRN1P58418 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 FAM86C2P-203ENST00000528684 1004 ntBASIC14.51□□□□□ -0.09
CLRN1P58418 AL135744.1-201ENST00000565098 629 ntBASIC14.51□□□□□ -0.09
CLRN1P58418 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.51□□□□□ -0.09
CLRN1P58418 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLRN1P58418 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CLRN1P58418 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.51□□□□□ -0.09
CLRN1P58418 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CLRN1P58418 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.51□□□□□ -0.09
CLRN1P58418 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.51□□□□□ -0.09
CLRN1P58418 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.51□□□□□ -0.09
CLRN1P58418 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CLRN1P58418 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLRN1P58418 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CLRN1P58418 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.5□□□□□ -0.09
CLRN1P58418 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.5□□□□□ -0.09
CLRN1P58418 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.5□□□□□ -0.09
CLRN1P58418 TFAMP1-201ENST00000412727 736 ntBASIC14.5□□□□□ -0.09
CLRN1P58418 AL355306.1-201ENST00000415580 579 ntBASIC14.5□□□□□ -0.09
CLRN1P58418 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.5□□□□□ -0.09
CLRN1P58418 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
CLRN1P58418 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
CLRN1P58418 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CLRN1P58418 RN7SL589P-201ENST00000481268 310 ntBASIC14.5□□□□□ -0.09
CLRN1P58418 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLRN1P58418 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLRN1P58418 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.5□□□□□ -0.09
CLRN1P58418 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLRN1P58418 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
CLRN1P58418 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms