Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH12P55289 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDH12P55289 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH12P55289 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH12P55289 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDH12P55289 AL031008.1-201ENST00000619963 541 ntBASIC15.16■□□□□ 0.02
CDH12P55289 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH12P55289 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH12P55289 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 AC012569.1-201ENST00000591191 1524 ntBASIC15.16■□□□□ 0.02
CDH12P55289 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDH12P55289 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDH12P55289 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH12P55289 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH12P55289 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH12P55289 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH12P55289 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH12P55289 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH12P55289 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 MST1L-201ENST00000442552 2185 ntBASIC15.15■□□□□ 0.02
CDH12P55289 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH12P55289 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH12P55289 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH12P55289 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH12P55289 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH12P55289 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 AC004870.1-201ENST00000315132 882 ntBASIC15.15■□□□□ 0.02
CDH12P55289 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH12P55289 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDH12P55289 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
CDH12P55289 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.15■□□□□ 0.02
CDH12P55289 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 AC092910.1-201ENST00000482027 1129 ntBASIC15.15■□□□□ 0.02
CDH12P55289 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH12P55289 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH12P55289 ACTL9-202ENST00000612068 1252 ntBASIC15.15■□□□□ 0.02
CDH12P55289 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH12P55289 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDH12P55289 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH12P55289 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CDH12P55289 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH12P55289 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDH12P55289 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH12P55289 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH12P55289 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH12P55289 FAM185BP-201ENST00000443595 716 ntBASIC15.14■□□□□ 0.01
CDH12P55289 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.14■□□□□ 0.01
CDH12P55289 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CDH12P55289 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CDH12P55289 AL049840.3-201ENST00000602669 611 ntBASIC15.14■□□□□ 0.01
CDH12P55289 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH12P55289 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH12P55289 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms