Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AFDNP55196 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AFDNP55196 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AFDNP55196 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.12■□□□□ 0.81
AFDNP55196 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
AFDNP55196 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.12■□□□□ 0.81
AFDNP55196 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AFDNP55196 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AFDNP55196 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.11■□□□□ 0.81
AFDNP55196 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.11■□□□□ 0.81
AFDNP55196 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.11■□□□□ 0.81
AFDNP55196 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.11■□□□□ 0.81
AFDNP55196 AL022328.1-201ENST00000610050 478 ntBASIC20.11■□□□□ 0.81
AFDNP55196 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.11■□□□□ 0.81
AFDNP55196 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
AFDNP55196 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AFDNP55196 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.11■□□□□ 0.81
AFDNP55196 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
AFDNP55196 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.11■□□□□ 0.81
AFDNP55196 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.11■□□□□ 0.81
AFDNP55196 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AFDNP55196 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AFDNP55196 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AFDNP55196 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AFDNP55196 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AFDNP55196 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
AFDNP55196 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
AFDNP55196 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
AFDNP55196 MIR648-201ENST00000385046 94 ntBASIC20.11■□□□□ 0.81
AFDNP55196 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AFDNP55196 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.11■□□□□ 0.81
AFDNP55196 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.11■□□□□ 0.81
AFDNP55196 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.11■□□□□ 0.81
AFDNP55196 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
AFDNP55196 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
AFDNP55196 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.1■□□□□ 0.81
AFDNP55196 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
AFDNP55196 INTS4P2-202ENST00000614726 2019 ntBASIC20.1■□□□□ 0.81
AFDNP55196 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
AFDNP55196 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AFDNP55196 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AFDNP55196 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AFDNP55196 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.1■□□□□ 0.81
AFDNP55196 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.1■□□□□ 0.81
AFDNP55196 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.1■□□□□ 0.81
AFDNP55196 SLC25A47P1-201ENST00000531577 414 ntBASIC20.1■□□□□ 0.81
AFDNP55196 TDH-203ENST00000531764 1110 ntBASIC20.1■□□□□ 0.81
AFDNP55196 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.1■□□□□ 0.81
AFDNP55196 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.1■□□□□ 0.81
AFDNP55196 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.1■□□□□ 0.81
AFDNP55196 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
AFDNP55196 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.1■□□□□ 0.81
AFDNP55196 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AFDNP55196 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.1■□□□□ 0.81
AFDNP55196 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AFDNP55196 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AFDNP55196 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AFDNP55196 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AFDNP55196 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.1■□□□□ 0.81
AFDNP55196 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.09■□□□□ 0.81
AFDNP55196 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 AC004987.2-201ENST00000395959 1148 ntBASIC20.09■□□□□ 0.81
AFDNP55196 HAUS4P1-201ENST00000406739 1145 ntBASIC20.09■□□□□ 0.81
AFDNP55196 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.09■□□□□ 0.81
AFDNP55196 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.09■□□□□ 0.81
AFDNP55196 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
AFDNP55196 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.09■□□□□ 0.81
AFDNP55196 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
AFDNP55196 AC243960.2-201ENST00000600996 747 ntBASIC20.09■□□□□ 0.81
AFDNP55196 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.09■□□□□ 0.81
AFDNP55196 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.09■□□□□ 0.81
AFDNP55196 AL139099.5-201ENST00000635274 300 ntBASIC20.09■□□□□ 0.81
AFDNP55196 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.09■□□□□ 0.81
AFDNP55196 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.09■□□□□ 0.81
AFDNP55196 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.09■□□□□ 0.81
AFDNP55196 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
AFDNP55196 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.09■□□□□ 0.81
AFDNP55196 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
AFDNP55196 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AFDNP55196 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.09■□□□□ 0.81
AFDNP55196 FO393414.2-201ENST00000405153 598 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms