Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
APOC4P55056 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
APOC4P55056 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.86□□□□□ -0.51
APOC4P55056 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.86□□□□□ -0.51
APOC4P55056 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC4P55056 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
APOC4P55056 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 RNF216P1-203ENST00000404404 2427 ntBASIC11.85□□□□□ -0.51
APOC4P55056 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 AC004890.2-204ENST00000481968 304 ntBASIC11.85□□□□□ -0.51
APOC4P55056 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.85□□□□□ -0.51
APOC4P55056 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 AC190387.1-201ENST00000551683 408 ntBASIC11.85□□□□□ -0.51
APOC4P55056 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 AC027307.3-201ENST00000594262 1100 ntBASIC11.85□□□□□ -0.51
APOC4P55056 LINC02084-201ENST00000606069 1096 ntBASIC11.85□□□□□ -0.51
APOC4P55056 AC004233.3-201ENST00000607794 1269 ntBASIC11.85□□□□□ -0.51
APOC4P55056 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
APOC4P55056 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.85□□□□□ -0.51
APOC4P55056 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.85□□□□□ -0.51
APOC4P55056 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
APOC4P55056 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
APOC4P55056 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
APOC4P55056 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.85□□□□□ -0.51
APOC4P55056 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.85□□□□□ -0.51
APOC4P55056 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
APOC4P55056 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
APOC4P55056 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
APOC4P55056 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.85□□□□□ -0.51
APOC4P55056 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
APOC4P55056 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
APOC4P55056 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms