Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RAD23BP54727 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.35■□□□□ 0.37
RAD23BP54727 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.35■□□□□ 0.37
RAD23BP54727 ALG1L8P-201ENST00000533887 760 ntBASIC17.35■□□□□ 0.37
RAD23BP54727 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.35■□□□□ 0.37
RAD23BP54727 AC061975.2-201ENST00000581722 295 ntBASIC17.35■□□□□ 0.37
RAD23BP54727 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.35■□□□□ 0.37
RAD23BP54727 AL365330.1-201ENST00000607459 531 ntBASIC17.35■□□□□ 0.37
RAD23BP54727 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.35■□□□□ 0.37
RAD23BP54727 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAD23BP54727 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.35■□□□□ 0.37
RAD23BP54727 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.35■□□□□ 0.37
RAD23BP54727 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAD23BP54727 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAD23BP54727 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.34■□□□□ 0.37
RAD23BP54727 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 HLA-H-201ENST00000383620 1096 ntBASIC17.34■□□□□ 0.37
RAD23BP54727 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAD23BP54727 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.34■□□□□ 0.37
RAD23BP54727 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAD23BP54727 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.34■□□□□ 0.37
RAD23BP54727 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.34■□□□□ 0.37
RAD23BP54727 RBPMS2P1-201ENST00000437762 623 ntBASIC17.34■□□□□ 0.37
RAD23BP54727 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.34■□□□□ 0.37
RAD23BP54727 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.34■□□□□ 0.37
RAD23BP54727 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.34■□□□□ 0.37
RAD23BP54727 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.34■□□□□ 0.37
RAD23BP54727 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 MIR4321-201ENST00000592276 80 ntBASIC17.34■□□□□ 0.37
RAD23BP54727 AC026691.1-201ENST00000602502 2017 ntBASIC17.34■□□□□ 0.37
RAD23BP54727 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.34■□□□□ 0.37
RAD23BP54727 GPALPP1-207ENST00000611650 899 ntBASIC17.34■□□□□ 0.37
RAD23BP54727 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.34■□□□□ 0.37
RAD23BP54727 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.34■□□□□ 0.37
RAD23BP54727 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAD23BP54727 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.33■□□□□ 0.37
RAD23BP54727 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAD23BP54727 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAD23BP54727 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAD23BP54727 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAD23BP54727 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAD23BP54727 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAD23BP54727 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAD23BP54727 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.33■□□□□ 0.37
RAD23BP54727 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.33■□□□□ 0.37
RAD23BP54727 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RAD23BP54727 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAD23BP54727 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 AL139400.1-201ENST00000366220 510 ntBASIC17.33■□□□□ 0.36
RAD23BP54727 SPDYE14P-201ENST00000442619 822 ntBASIC17.33■□□□□ 0.36
RAD23BP54727 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.33■□□□□ 0.36
RAD23BP54727 RNA5SP410-201ENST00000516285 106 ntBASIC17.33■□□□□ 0.36
RAD23BP54727 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.33■□□□□ 0.36
RAD23BP54727 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.33■□□□□ 0.36
RAD23BP54727 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RAD23BP54727 RARRES2P9-201ENST00000565168 469 ntBASIC17.33■□□□□ 0.36
RAD23BP54727 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.33■□□□□ 0.36
RAD23BP54727 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAD23BP54727 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms