Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 FAM21FP-201ENST00000426241 1131 ntBASIC19.81■□□□□ 0.76
NUP98P52948 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP98P52948 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NUP98P52948 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.81■□□□□ 0.76
NUP98P52948 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.81■□□□□ 0.76
NUP98P52948 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP98P52948 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.81■□□□□ 0.76
NUP98P52948 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.81■□□□□ 0.76
NUP98P52948 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP98P52948 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.81■□□□□ 0.76
NUP98P52948 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NUP98P52948 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP98P52948 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.81■□□□□ 0.76
NUP98P52948 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP98P52948 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.81■□□□□ 0.76
NUP98P52948 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
NUP98P52948 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP98P52948 RNA5SP412-201ENST00000516234 123 ntBASIC19.81■□□□□ 0.76
NUP98P52948 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP98P52948 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP98P52948 AL583810.1-201ENST00000553344 1045 ntBASIC19.81■□□□□ 0.76
NUP98P52948 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 RHOXF1P1-202ENST00000635473 501 ntBASIC19.81■□□□□ 0.76
NUP98P52948 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP98P52948 TUBB1P2-201ENST00000422712 1306 ntBASIC19.81■□□□□ 0.76
NUP98P52948 TUBB1P1-201ENST00000503144 1300 ntBASIC19.81■□□□□ 0.76
NUP98P52948 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NUP98P52948 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NUP98P52948 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.8■□□□□ 0.76
NUP98P52948 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NUP98P52948 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.8■□□□□ 0.76
NUP98P52948 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 AC018892.3-201ENST00000623986 2499 ntBASIC19.8■□□□□ 0.76
NUP98P52948 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.8■□□□□ 0.76
NUP98P52948 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
NUP98P52948 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.8■□□□□ 0.76
NUP98P52948 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 AC108725.1-201ENST00000495472 409 ntBASIC19.8■□□□□ 0.76
NUP98P52948 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.8■□□□□ 0.76
NUP98P52948 AC026410.3-201ENST00000514280 936 ntBASIC19.8■□□□□ 0.76
NUP98P52948 AP001889.1-201ENST00000525414 633 ntBASIC19.8■□□□□ 0.76
NUP98P52948 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.8■□□□□ 0.76
NUP98P52948 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.8■□□□□ 0.76
NUP98P52948 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NUP98P52948 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP98P52948 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.79■□□□□ 0.76
NUP98P52948 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
NUP98P52948 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.79■□□□□ 0.76
NUP98P52948 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.79■□□□□ 0.76
NUP98P52948 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NUP98P52948 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP98P52948 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NUP98P52948 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
NUP98P52948 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP98P52948 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.79■□□□□ 0.76
NUP98P52948 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NUP98P52948 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.79■□□□□ 0.76
NUP98P52948 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP98P52948 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NUP98P52948 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
NUP98P52948 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP98P52948 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.79■□□□□ 0.76
NUP98P52948 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms