Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SLC1A1P43005 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A1P43005 AC007967.2-201ENST00000432613 625 ntBASIC16.96■□□□□ 0.31
SLC1A1P43005 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
SLC1A1P43005 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
SLC1A1P43005 AC098859.1-201ENST00000502915 1238 ntBASIC16.96■□□□□ 0.31
SLC1A1P43005 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A1P43005 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SLC1A1P43005 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SLC1A1P43005 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
SLC1A1P43005 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A1P43005 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC1A1P43005 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC1A1P43005 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A1P43005 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC1A1P43005 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC1A1P43005 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A1P43005 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A1P43005 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC1A1P43005 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A1P43005 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A1P43005 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SLC1A1P43005 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A1P43005 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SLC1A1P43005 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A1P43005 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A1P43005 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC1A1P43005 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A1P43005 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SLC1A1P43005 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A1P43005 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC1A1P43005 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SLC1A1P43005 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC1A1P43005 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A1P43005 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SLC1A1P43005 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
SLC1A1P43005 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A1P43005 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC1A1P43005 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC1A1P43005 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC1A1P43005 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 LINC00554-201ENST00000564841 3011 ntBASIC16.95■□□□□ 0.3
SLC1A1P43005 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A1P43005 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLC1A1P43005 AC103702.1-201ENST00000548801 2630 ntBASIC16.95■□□□□ 0.3
SLC1A1P43005 ZNF259P1-201ENST00000407656 1365 ntBASIC16.95■□□□□ 0.3
SLC1A1P43005 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC1A1P43005 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC1A1P43005 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A1P43005 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A1P43005 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A1P43005 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC1A1P43005 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC1A1P43005 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC1A1P43005 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 IL9RP2-201ENST00000423948 1312 ntBASIC16.95■□□□□ 0.3
SLC1A1P43005 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC1A1P43005 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A1P43005 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC1A1P43005 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC1A1P43005 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.94■□□□□ 0.3
SLC1A1P43005 RARRES2P8-201ENST00000566335 367 ntBASIC16.94■□□□□ 0.3
SLC1A1P43005 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 AC024267.1-201ENST00000582320 895 ntBASIC16.94■□□□□ 0.3
SLC1A1P43005 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC1A1P43005 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC1A1P43005 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms