Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.19□□□□□ -0.14
GDNFP39905 AC023908.3-201ENST00000564211 3047 ntBASIC14.19□□□□□ -0.14
GDNFP39905 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.19□□□□□ -0.14
GDNFP39905 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
GDNFP39905 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.19□□□□□ -0.14
GDNFP39905 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDNFP39905 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 TMBIM7P-203ENST00000641617 1718 ntBASIC14.18□□□□□ -0.14
GDNFP39905 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.18□□□□□ -0.14
GDNFP39905 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.18□□□□□ -0.14
GDNFP39905 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.18□□□□□ -0.14
GDNFP39905 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.18□□□□□ -0.14
GDNFP39905 LINC00982-205ENST00000420957 435 ntBASIC14.18□□□□□ -0.14
GDNFP39905 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.18□□□□□ -0.14
GDNFP39905 SAPCD2P3-201ENST00000455031 850 ntBASIC14.18□□□□□ -0.14
GDNFP39905 EMBP1-201ENST00000458200 901 ntBASIC14.18□□□□□ -0.14
GDNFP39905 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.18□□□□□ -0.14
GDNFP39905 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 AP003680.1-201ENST00000598970 3660 ntBASIC14.18□□□□□ -0.14
GDNFP39905 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 AC020658.6-201ENST00000623564 1870 ntBASIC14.18□□□□□ -0.14
GDNFP39905 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
GDNFP39905 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GDNFP39905 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
GDNFP39905 AC106881.1-201ENST00000605849 3329 ntBASIC14.18□□□□□ -0.14
GDNFP39905 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDNFP39905 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.17□□□□□ -0.14
GDNFP39905 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.17□□□□□ -0.14
GDNFP39905 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 PCGF3-213ENST00000620529 1899 ntBASIC14.17□□□□□ -0.14
GDNFP39905 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
GDNFP39905 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.17□□□□□ -0.14
GDNFP39905 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDNFP39905 MIR648-201ENST00000385046 94 ntBASIC14.17□□□□□ -0.14
GDNFP39905 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.17□□□□□ -0.14
GDNFP39905 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GDNFP39905 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms