Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CLCN1P35523 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN1P35523 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN1P35523 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN1P35523 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLCN1P35523 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN1P35523 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN1P35523 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN1P35523 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCN1P35523 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLCN1P35523 AC069224.1-201ENST00000566372 1715 ntBASIC18.5■□□□□ 0.55
CLCN1P35523 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CLCN1P35523 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
CLCN1P35523 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.5■□□□□ 0.55
CLCN1P35523 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.5■□□□□ 0.55
CLCN1P35523 NUS1P1-201ENST00000446295 882 ntBASIC18.5■□□□□ 0.55
CLCN1P35523 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.5■□□□□ 0.55
CLCN1P35523 AP001269.4-201ENST00000609611 512 ntBASIC18.5■□□□□ 0.55
CLCN1P35523 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.5■□□□□ 0.55
CLCN1P35523 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLCN1P35523 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CLCN1P35523 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.5■□□□□ 0.55
CLCN1P35523 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLCN1P35523 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLCN1P35523 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLCN1P35523 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLCN1P35523 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLCN1P35523 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCN1P35523 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLCN1P35523 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN1P35523 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCN1P35523 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 AP005117.1-201ENST00000584346 1413 ntBASIC18.49■□□□□ 0.55
CLCN1P35523 SIGLEC16-201ENST00000599858 1437 ntBASIC18.49■□□□□ 0.55
CLCN1P35523 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN1P35523 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 BEND3P1-201ENST00000421591 1944 ntBASIC18.49■□□□□ 0.55
CLCN1P35523 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCN1P35523 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN1P35523 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN1P35523 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 AL020989.1-201ENST00000422979 469 ntBASIC18.49■□□□□ 0.55
CLCN1P35523 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCN1P35523 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCN1P35523 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
CLCN1P35523 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCN1P35523 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 AC073592.4-201ENST00000623827 446 ntBASIC18.49■□□□□ 0.55
CLCN1P35523 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCN1P35523 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CLCN1P35523 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLCN1P35523 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLCN1P35523 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLCN1P35523 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCN1P35523 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCN1P35523 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLCN1P35523 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
CLCN1P35523 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCN1P35523 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCN1P35523 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
CLCN1P35523 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCN1P35523 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLCN1P35523 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 ABR-228ENST00000574437 3196 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCN1P35523 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCN1P35523 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.48■□□□□ 0.55
CLCN1P35523 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms