Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
USP6P35125 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.54■■□□□ 1.04
USP6P35125 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
USP6P35125 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
USP6P35125 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
USP6P35125 AC009486.1-201ENST00000569860 813 ntBASIC21.54■■□□□ 1.04
USP6P35125 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.54■■□□□ 1.04
USP6P35125 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.54■■□□□ 1.04
USP6P35125 AC244669.2-201ENST00000612320 853 ntBASIC21.54■■□□□ 1.04
USP6P35125 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.54■■□□□ 1.04
USP6P35125 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC21.54■■□□□ 1.04
USP6P35125 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
USP6P35125 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.53■■□□□ 1.04
USP6P35125 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
USP6P35125 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.53■■□□□ 1.04
USP6P35125 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
USP6P35125 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
USP6P35125 AC026410.3-201ENST00000514280 936 ntBASIC21.53■■□□□ 1.04
USP6P35125 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.53■■□□□ 1.04
USP6P35125 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.53■■□□□ 1.04
USP6P35125 AP001063.1-201ENST00000568332 529 ntBASIC21.53■■□□□ 1.04
USP6P35125 AC015910.1-201ENST00000579400 975 ntBASIC21.53■■□□□ 1.04
USP6P35125 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.53■■□□□ 1.04
USP6P35125 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
USP6P35125 AC107373.2-201ENST00000607735 490 ntBASIC21.53■■□□□ 1.04
USP6P35125 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.53■■□□□ 1.04
USP6P35125 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
USP6P35125 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
USP6P35125 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.52■■□□□ 1.04
USP6P35125 AC022211.2-201ENST00000585075 2527 ntBASIC21.52■■□□□ 1.04
USP6P35125 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.52■■□□□ 1.04
USP6P35125 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
USP6P35125 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.52■■□□□ 1.04
USP6P35125 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6P35125 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
USP6P35125 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
USP6P35125 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
USP6P35125 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC21.52■■□□□ 1.04
USP6P35125 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
USP6P35125 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.52■■□□□ 1.04
USP6P35125 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.52■■□□□ 1.04
USP6P35125 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.52■■□□□ 1.04
USP6P35125 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.52■■□□□ 1.04
USP6P35125 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
USP6P35125 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.52■■□□□ 1.04
USP6P35125 MIR6869-201ENST00000619434 62 ntBASIC21.52■■□□□ 1.04
USP6P35125 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6P35125 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6P35125 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6P35125 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
USP6P35125 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
USP6P35125 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
USP6P35125 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.51■■□□□ 1.03
USP6P35125 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
USP6P35125 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
USP6P35125 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.51■■□□□ 1.03
USP6P35125 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.51■■□□□ 1.03
USP6P35125 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6P35125 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
USP6P35125 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6P35125 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
USP6P35125 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USP6P35125 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6P35125 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC21.51■■□□□ 1.03
USP6P35125 AC093433.1-201ENST00000458048 571 ntBASIC21.51■■□□□ 1.03
USP6P35125 AC022137.2-201ENST00000503482 481 ntBASIC21.51■■□□□ 1.03
USP6P35125 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.51■■□□□ 1.03
USP6P35125 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.51■■□□□ 1.03
USP6P35125 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.51■■□□□ 1.03
USP6P35125 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.51■■□□□ 1.03
USP6P35125 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
USP6P35125 CYP2AB1P-202ENST00000454440 1456 ntBASIC21.51■■□□□ 1.03
USP6P35125 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.51■■□□□ 1.03
USP6P35125 AC080080.1-201ENST00000625121 2420 ntBASIC21.51■■□□□ 1.03
USP6P35125 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6P35125 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC21.51■■□□□ 1.03
USP6P35125 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6P35125 AGGF1P2-201ENST00000426656 2106 ntBASIC21.51■■□□□ 1.03
USP6P35125 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
USP6P35125 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
USP6P35125 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6P35125 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6P35125 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
USP6P35125 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6P35125 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms