Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.99□□□□□ -0.49
CKS2P33552 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.99□□□□□ -0.49
CKS2P33552 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 AC007292.2-201ENST00000593524 1812 ntBASIC11.99□□□□□ -0.49
CKS2P33552 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
CKS2P33552 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.99□□□□□ -0.49
CKS2P33552 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.99□□□□□ -0.49
CKS2P33552 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 AC026748.1-201ENST00000624349 3251 ntBASIC11.99□□□□□ -0.49
CKS2P33552 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 PEG13-201ENST00000631594 5667 ntBASIC11.99□□□□□ -0.49
CKS2P33552 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CKS2P33552 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
CKS2P33552 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CKS2P33552 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.98□□□□□ -0.49
CKS2P33552 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.98□□□□□ -0.49
CKS2P33552 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 TOP3BP1-201ENST00000420768 1380 ntBASIC11.98□□□□□ -0.49
CKS2P33552 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 AL020989.1-201ENST00000422979 469 ntBASIC11.98□□□□□ -0.49
CKS2P33552 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CKS2P33552 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CKS2P33552 RNF126P1-202ENST00000569893 925 ntBASIC11.98□□□□□ -0.49
CKS2P33552 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CKS2P33552 TERC-201ENST00000602385 541 ntBASIC11.98□□□□□ -0.49
CKS2P33552 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.98□□□□□ -0.49
CKS2P33552 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CKS2P33552 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.98□□□□□ -0.49
CKS2P33552 AC124864.1-201ENST00000623408 392 ntBASIC11.98□□□□□ -0.49
CKS2P33552 AL590326.2-201ENST00000625139 305 ntBASIC11.98□□□□□ -0.49
CKS2P33552 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CKS2P33552 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS2P33552 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS2P33552 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS2P33552 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS2P33552 AC092919.2-201ENST00000623631 1645 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms