Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNA3P32297 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CHRNA3P32297 MIR4469-201ENST00000583919 79 ntBASIC17.13■□□□□ 0.33
CHRNA3P32297 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.13■□□□□ 0.33
CHRNA3P32297 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNA3P32297 AC068137.2-201ENST00000605408 478 ntBASIC17.13■□□□□ 0.33
CHRNA3P32297 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.13■□□□□ 0.33
CHRNA3P32297 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNA3P32297 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNA3P32297 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNA3P32297 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.13■□□□□ 0.33
CHRNA3P32297 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHRNA3P32297 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.12■□□□□ 0.33
CHRNA3P32297 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CHRNA3P32297 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 AL592424.1-201ENST00000563624 1536 ntBASIC17.12■□□□□ 0.33
CHRNA3P32297 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHRNA3P32297 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CHRNA3P32297 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA3P32297 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHRNA3P32297 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.12■□□□□ 0.33
CHRNA3P32297 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.12■□□□□ 0.33
CHRNA3P32297 FAM58CP-201ENST00000435741 640 ntBASIC17.12■□□□□ 0.33
CHRNA3P32297 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA3P32297 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNA3P32297 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.12■□□□□ 0.33
CHRNA3P32297 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.12■□□□□ 0.33
CHRNA3P32297 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.12■□□□□ 0.33
CHRNA3P32297 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNA3P32297 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA3P32297 AC079781.4-201ENST00000641908 219 ntBASIC17.12■□□□□ 0.33
CHRNA3P32297 AL645728.2-201ENST00000641974 660 ntBASIC17.12■□□□□ 0.33
CHRNA3P32297 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 AL513477.1-201ENST00000602865 2407 ntBASIC17.12■□□□□ 0.33
CHRNA3P32297 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHRNA3P32297 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNA3P32297 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA3P32297 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHRNA3P32297 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA3P32297 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.12■□□□□ 0.33
CHRNA3P32297 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA3P32297 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CHRNA3P32297 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHRNA3P32297 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA3P32297 MST1L-201ENST00000442552 2185 ntBASIC17.11■□□□□ 0.33
CHRNA3P32297 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA3P32297 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA3P32297 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNA3P32297 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNA3P32297 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CHRNA3P32297 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNA3P32297 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 MIR4515-201ENST00000584082 81 ntBASIC17.11■□□□□ 0.33
CHRNA3P32297 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 ELL2P1-201ENST00000413990 1906 ntBASIC17.11■□□□□ 0.33
CHRNA3P32297 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA3P32297 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 AC144831.1-201ENST00000573312 2656 ntBASIC17.11■□□□□ 0.33
CHRNA3P32297 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA3P32297 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA3P32297 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA3P32297 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHRNA3P32297 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.1■□□□□ 0.33
CHRNA3P32297 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms