Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.68□□□□□ -0.06
GDF1P27539 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.68□□□□□ -0.06
GDF1P27539 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.68□□□□□ -0.06
GDF1P27539 TSPY16P-201ENST00000449843 468 ntBASIC14.68□□□□□ -0.06
GDF1P27539 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.68□□□□□ -0.06
GDF1P27539 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.68□□□□□ -0.06
GDF1P27539 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.68□□□□□ -0.06
GDF1P27539 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
GDF1P27539 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.68□□□□□ -0.06
GDF1P27539 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
GDF1P27539 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
GDF1P27539 AC068587.6-202ENST00000641839 5619 ntBASIC14.68□□□□□ -0.06
GDF1P27539 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GDF1P27539 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
GDF1P27539 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
GDF1P27539 PKD1P5-201ENST00000532415 10291 ntBASIC14.67□□□□□ -0.06
GDF1P27539 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.67□□□□□ -0.06
GDF1P27539 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.67□□□□□ -0.06
GDF1P27539 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.67□□□□□ -0.06
GDF1P27539 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.67□□□□□ -0.06
GDF1P27539 UGT1A2P-201ENST00000454886 866 ntBASIC14.67□□□□□ -0.06
GDF1P27539 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.67□□□□□ -0.06
GDF1P27539 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.67□□□□□ -0.06
GDF1P27539 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
GDF1P27539 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.67□□□□□ -0.06
GDF1P27539 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
GDF1P27539 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GDF1P27539 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDF1P27539 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.66□□□□□ -0.06
GDF1P27539 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GDF1P27539 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.66□□□□□ -0.06
GDF1P27539 AC022144.1-201ENST00000602255 1580 ntBASIC14.66□□□□□ -0.06
GDF1P27539 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.66□□□□□ -0.06
GDF1P27539 AL080243.2-201ENST00000418783 582 ntBASIC14.66□□□□□ -0.06
GDF1P27539 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 SERBP1P3-201ENST00000459980 809 ntBASIC14.66□□□□□ -0.06
GDF1P27539 AC004890.2-204ENST00000481968 304 ntBASIC14.66□□□□□ -0.06
GDF1P27539 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.66□□□□□ -0.06
GDF1P27539 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 LINC02084-201ENST00000606069 1096 ntBASIC14.66□□□□□ -0.06
GDF1P27539 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.66□□□□□ -0.06
GDF1P27539 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms