Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN3P20807 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN3P20807 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN3P20807 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN3P20807 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CAPN3P20807 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN3P20807 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.65■□□□□ 0.1
CAPN3P20807 AC244107.1-201ENST00000442033 332 ntBASIC15.65■□□□□ 0.1
CAPN3P20807 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.65■□□□□ 0.1
CAPN3P20807 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN3P20807 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.65■□□□□ 0.1
CAPN3P20807 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN3P20807 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN3P20807 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN3P20807 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CAPN3P20807 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN3P20807 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CAPN3P20807 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN3P20807 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN3P20807 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN3P20807 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.64■□□□□ 0.1
CAPN3P20807 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 AC006058.4-201ENST00000624016 1670 ntBASIC15.64■□□□□ 0.09
CAPN3P20807 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CAPN3P20807 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 LAGE3P1-201ENST00000425356 484 ntBASIC15.64■□□□□ 0.09
CAPN3P20807 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 DNAJB3-202ENST00000449667 1266 ntBASIC15.64■□□□□ 0.09
CAPN3P20807 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.64■□□□□ 0.09
CAPN3P20807 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.64■□□□□ 0.09
CAPN3P20807 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 AC021087.4-201ENST00000563761 564 ntBASIC15.64■□□□□ 0.09
CAPN3P20807 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 AC006557.2-201ENST00000592985 1240 ntBASIC15.64■□□□□ 0.09
CAPN3P20807 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 KRT18P28-201ENST00000453838 1332 ntBASIC15.64■□□□□ 0.09
CAPN3P20807 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN3P20807 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN3P20807 PKD1P5-201ENST00000532415 10291 ntBASIC15.64■□□□□ 0.09
CAPN3P20807 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN3P20807 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms