Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.6■□□□□ 0.57
SCG2P13521 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCG2P13521 TUBB3P1-201ENST00000405796 1332 ntBASIC18.6■□□□□ 0.57
SCG2P13521 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.6■□□□□ 0.57
SCG2P13521 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SCG2P13521 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCG2P13521 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.6■□□□□ 0.57
SCG2P13521 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.6■□□□□ 0.57
SCG2P13521 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.6■□□□□ 0.57
SCG2P13521 AC243562.2-201ENST00000561247 970 ntBASIC18.6■□□□□ 0.57
SCG2P13521 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SCG2P13521 AC011467.4-201ENST00000594891 528 ntBASIC18.6■□□□□ 0.57
SCG2P13521 AC092364.2-202ENST00000597012 1073 ntBASIC18.6■□□□□ 0.57
SCG2P13521 RN7SL828P-201ENST00000607615 303 ntBASIC18.6■□□□□ 0.57
SCG2P13521 AL133215.2-201ENST00000609242 977 ntBASIC18.6■□□□□ 0.57
SCG2P13521 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SCG2P13521 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG2P13521 AC010491.1-201ENST00000563101 2797 ntBASIC18.6■□□□□ 0.57
SCG2P13521 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG2P13521 AC112504.1-201ENST00000623415 1841 ntBASIC18.6■□□□□ 0.57
SCG2P13521 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG2P13521 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SCG2P13521 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.6■□□□□ 0.57
SCG2P13521 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SCG2P13521 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SCG2P13521 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG2P13521 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG2P13521 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SCG2P13521 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SCG2P13521 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG2P13521 FAM8A3P-201ENST00000427218 844 ntBASIC18.59■□□□□ 0.57
SCG2P13521 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG2P13521 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.59■□□□□ 0.57
SCG2P13521 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.59■□□□□ 0.57
SCG2P13521 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG2P13521 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.59■□□□□ 0.57
SCG2P13521 AC051619.7-201ENST00000568314 623 ntBASIC18.59■□□□□ 0.57
SCG2P13521 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG2P13521 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG2P13521 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG2P13521 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.59■□□□□ 0.57
SCG2P13521 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
SCG2P13521 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.58■□□□□ 0.57
SCG2P13521 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SCG2P13521 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCG2P13521 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCG2P13521 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCG2P13521 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.58■□□□□ 0.57
SCG2P13521 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SCG2P13521 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCG2P13521 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SCG2P13521 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SCG2P13521 AC004987.2-201ENST00000395959 1148 ntBASIC18.58■□□□□ 0.56
SCG2P13521 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.58■□□□□ 0.56
SCG2P13521 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.58■□□□□ 0.56
SCG2P13521 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.58■□□□□ 0.56
SCG2P13521 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.58■□□□□ 0.56
SCG2P13521 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.58■□□□□ 0.56
SCG2P13521 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.58■□□□□ 0.56
SCG2P13521 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.58■□□□□ 0.56
SCG2P13521 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.58■□□□□ 0.56
SCG2P13521 BNIP3P1-202ENST00000550043 1585 ntBASIC18.58■□□□□ 0.56
SCG2P13521 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SCG2P13521 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG2P13521 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.58■□□□□ 0.56
SCG2P13521 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCG2P13521 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCG2P13521 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCG2P13521 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCG2P13521 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SCG2P13521 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SCG2P13521 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCG2P13521 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms