Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HOXD8P13378 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXD8P13378 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXD8P13378 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXD8P13378 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXD8P13378 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HOXD8P13378 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXD8P13378 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 ENPP7P5-201ENST00000541031 1031 ntBASIC17.65■□□□□ 0.42
HOXD8P13378 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXD8P13378 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXD8P13378 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.65■□□□□ 0.42
HOXD8P13378 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.65■□□□□ 0.42
HOXD8P13378 CU634019.7-201ENST00000624153 1185 ntBASIC17.65■□□□□ 0.42
HOXD8P13378 FP236241.2-201ENST00000624906 1185 ntBASIC17.65■□□□□ 0.42
HOXD8P13378 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXD8P13378 COX11-210ENST00000639671 696 ntBASIC17.65■□□□□ 0.42
HOXD8P13378 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 AC012313.1-201ENST00000593393 3059 ntBASIC17.65■□□□□ 0.42
HOXD8P13378 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXD8P13378 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXD8P13378 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXD8P13378 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXD8P13378 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXD8P13378 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXD8P13378 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
HOXD8P13378 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HOXD8P13378 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 AC006449.6-201ENST00000612330 2296 ntBASIC17.64■□□□□ 0.41
HOXD8P13378 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HOXD8P13378 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 AC234783.1-201ENST00000441761 496 ntBASIC17.64■□□□□ 0.41
HOXD8P13378 CROCCP4-201ENST00000457096 498 ntBASIC17.64■□□□□ 0.41
HOXD8P13378 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXD8P13378 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXD8P13378 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HOXD8P13378 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXD8P13378 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXD8P13378 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXD8P13378 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXD8P13378 MIR6775-201ENST00000617557 69 ntBASIC17.64■□□□□ 0.41
HOXD8P13378 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HOXD8P13378 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HOXD8P13378 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXD8P13378 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HOXD8P13378 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXD8P13378 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXD8P13378 INTS4P2-202ENST00000614726 2019 ntBASIC17.64■□□□□ 0.41
HOXD8P13378 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXD8P13378 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXD8P13378 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXD8P13378 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXD8P13378 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 MIR648-201ENST00000385046 94 ntBASIC17.63■□□□□ 0.41
HOXD8P13378 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXD8P13378 RPL13AP25-201ENST00000484130 612 ntBASIC17.63■□□□□ 0.41
HOXD8P13378 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 SLC25A47P1-201ENST00000531577 414 ntBASIC17.63■□□□□ 0.41
HOXD8P13378 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms