Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.78■□□□□ 0.44
SRGAP2CP0DJJ0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 SPDYE17-201ENST00000412399 783 ntBASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 FAM207CP-201ENST00000443486 507 ntBASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 AL512361.1-201ENST00000554200 418 ntBASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 AC008738.7-201ENST00000609744 511 ntBASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.77■□□□□ 0.44
SRGAP2CP0DJJ0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRGAP2CP0DJJ0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 CYP4F24P-201ENST00000586049 1580 ntBASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 RN7SL618P-201ENST00000477850 296 ntBASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 PCDH8P1-201ENST00000428983 2773 ntBASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.76■□□□□ 0.43
SRGAP2CP0DJJ0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRGAP2CP0DJJ0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms