Protein–RNA interactions for Protein: P0DI80

SMIM6, Small integral membrane protein 6, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM6P0DI80 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM6P0DI80 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM6P0DI80 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SMIM6P0DI80 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.11□□□□□ -0.47
SMIM6P0DI80 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM6P0DI80 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM6P0DI80 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 AL022323.5-201ENST00000624101 2059 ntBASIC12.1□□□□□ -0.47
SMIM6P0DI80 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.1□□□□□ -0.47
SMIM6P0DI80 PEG13-201ENST00000631594 5667 ntBASIC12.1□□□□□ -0.47
SMIM6P0DI80 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 AL591742.1-201ENST00000604433 565 ntBASIC12.1□□□□□ -0.47
SMIM6P0DI80 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 MIR193BHG-211ENST00000641433 5365 ntBASIC12.1□□□□□ -0.47
SMIM6P0DI80 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM6P0DI80 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 AC019069.1-201ENST00000610008 1333 ntBASIC12.1□□□□□ -0.47
SMIM6P0DI80 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM6P0DI80 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 AC113367.3-201ENST00000508316 1912 ntBASIC12.09□□□□□ -0.47
SMIM6P0DI80 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.09□□□□□ -0.47
SMIM6P0DI80 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.09□□□□□ -0.47
SMIM6P0DI80 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM6P0DI80 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM6P0DI80 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM6P0DI80 PRSS44-201ENST00000515154 1146 ntBASIC12.09□□□□□ -0.47
SMIM6P0DI80 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM6P0DI80 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SMIM6P0DI80 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 MTHFR-210ENST00000641407 2387 ntBASIC12.09□□□□□ -0.47
SMIM6P0DI80 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM6P0DI80 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 PCDHA5-203ENST00000614258 4248 ntBASIC12.09□□□□□ -0.47
SMIM6P0DI80 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM6P0DI80 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM6P0DI80 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms