Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBCP0CG48 AF186996.4-201ENST00000467186 377 ntBASIC14.28□□□□□ -0.12
UBCP0CG48 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.28□□□□□ -0.12
UBCP0CG48 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.28□□□□□ -0.12
UBCP0CG48 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.28□□□□□ -0.12
UBCP0CG48 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.28□□□□□ -0.12
UBCP0CG48 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.28□□□□□ -0.12
UBCP0CG48 CLEC4GP1-201ENST00000596555 870 ntBASIC14.28□□□□□ -0.12
UBCP0CG48 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.28□□□□□ -0.12
UBCP0CG48 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBCP0CG48 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
UBCP0CG48 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.28□□□□□ -0.12
UBCP0CG48 AL645728.2-201ENST00000641974 660 ntBASIC14.28□□□□□ -0.12
UBCP0CG48 MIR600HG-201ENST00000449175 5984 ntBASIC14.28□□□□□ -0.12
UBCP0CG48 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
UBCP0CG48 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBCP0CG48 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.28□□□□□ -0.12
UBCP0CG48 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBCP0CG48 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.27□□□□□ -0.12
UBCP0CG48 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.27□□□□□ -0.12
UBCP0CG48 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.27□□□□□ -0.12
UBCP0CG48 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.27□□□□□ -0.12
UBCP0CG48 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
UBCP0CG48 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.27□□□□□ -0.12
UBCP0CG48 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UBCP0CG48 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UBCP0CG48 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
UBCP0CG48 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBCP0CG48 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
UBCP0CG48 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
UBCP0CG48 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.27□□□□□ -0.13
UBCP0CG48 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.27□□□□□ -0.13
UBCP0CG48 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UBCP0CG48 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.27□□□□□ -0.13
UBCP0CG48 CXCL1P1-201ENST00000502804 216 ntBASIC14.27□□□□□ -0.13
UBCP0CG48 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.27□□□□□ -0.13
UBCP0CG48 AL031432.2-201ENST00000566714 459 ntBASIC14.27□□□□□ -0.13
UBCP0CG48 AL928711.1-201ENST00000570165 459 ntBASIC14.27□□□□□ -0.13
UBCP0CG48 OR7E47P-204ENST00000575924 449 ntBASIC14.27□□□□□ -0.13
UBCP0CG48 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.27□□□□□ -0.13
UBCP0CG48 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
UBCP0CG48 AC004790.2-201ENST00000623588 572 ntBASIC14.27□□□□□ -0.13
UBCP0CG48 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.27□□□□□ -0.13
UBCP0CG48 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.27□□□□□ -0.13
UBCP0CG48 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.27□□□□□ -0.13
UBCP0CG48 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.27□□□□□ -0.13
UBCP0CG48 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
UBCP0CG48 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBCP0CG48 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UBCP0CG48 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.26□□□□□ -0.13
UBCP0CG48 AP002414.3-201ENST00000589352 1468 ntBASIC14.26□□□□□ -0.13
UBCP0CG48 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.26□□□□□ -0.13
UBCP0CG48 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.26□□□□□ -0.13
UBCP0CG48 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBCP0CG48 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
UBCP0CG48 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms