Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MTDHP4-201ENST00000600287 670 ntBASIC17.94■□□□□ 0.46
TPM1P09493 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.94■□□□□ 0.46
TPM1P09493 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TPM1P09493 GGTLC5P-201ENST00000617623 998 ntBASIC17.94■□□□□ 0.46
TPM1P09493 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM1P09493 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TPM1P09493 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
TPM1P09493 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.94■□□□□ 0.46
TPM1P09493 AC005622.1-201ENST00000636801 1703 ntBASIC17.94■□□□□ 0.46
TPM1P09493 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM1P09493 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TPM1P09493 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM1P09493 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.94■□□□□ 0.46
TPM1P09493 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM1P09493 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
TPM1P09493 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TPM1P09493 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TPM1P09493 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM1P09493 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM1P09493 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM1P09493 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
TPM1P09493 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.93■□□□□ 0.46
TPM1P09493 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM1P09493 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.93■□□□□ 0.46
TPM1P09493 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.93■□□□□ 0.46
TPM1P09493 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM1P09493 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.93■□□□□ 0.46
TPM1P09493 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM1P09493 PGM5P2-202ENST00000637225 1043 ntBASIC17.93■□□□□ 0.46
TPM1P09493 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM1P09493 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM1P09493 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.93■□□□□ 0.46
TPM1P09493 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM1P09493 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM1P09493 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM1P09493 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM1P09493 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.93■□□□□ 0.46
TPM1P09493 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM1P09493 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM1P09493 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TPM1P09493 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM1P09493 U82695.1-201ENST00000635752 1889 ntBASIC17.92■□□□□ 0.46
TPM1P09493 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TPM1P09493 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TPM1P09493 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM1P09493 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM1P09493 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.92■□□□□ 0.46
TPM1P09493 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.92■□□□□ 0.46
TPM1P09493 SCARNA2-201ENST00000458748 420 ntBASIC17.92■□□□□ 0.46
TPM1P09493 KRT18P21-201ENST00000515767 1272 ntBASIC17.92■□□□□ 0.46
TPM1P09493 AC107918.2-201ENST00000530817 355 ntBASIC17.92■□□□□ 0.46
TPM1P09493 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM1P09493 AC006557.2-201ENST00000592985 1240 ntBASIC17.92■□□□□ 0.46
TPM1P09493 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TPM1P09493 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM1P09493 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM1P09493 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
TPM1P09493 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM1P09493 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM1P09493 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM1P09493 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TPM1P09493 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM1P09493 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM1P09493 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.91■□□□□ 0.46
TPM1P09493 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 ARMC10P1-201ENST00000313754 855 ntBASIC17.91■□□□□ 0.46
TPM1P09493 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM1P09493 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TPM1P09493 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM1P09493 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM1P09493 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM1P09493 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms