Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.19□□□□□ -0.14
SFTPBP07988 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.18□□□□□ -0.14
SFTPBP07988 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.18□□□□□ -0.14
SFTPBP07988 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SFTPBP07988 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.18□□□□□ -0.14
SFTPBP07988 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 AL365203.3-201ENST00000609742 2057 ntBASIC14.18□□□□□ -0.14
SFTPBP07988 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SFTPBP07988 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SFTPBP07988 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.18□□□□□ -0.14
SFTPBP07988 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.18□□□□□ -0.14
SFTPBP07988 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.18□□□□□ -0.14
SFTPBP07988 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.18□□□□□ -0.14
SFTPBP07988 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 CYP2A7P1-201ENST00000595391 815 ntBASIC14.18□□□□□ -0.14
SFTPBP07988 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.18□□□□□ -0.14
SFTPBP07988 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
SFTPBP07988 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SFTPBP07988 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.18□□□□□ -0.14
SFTPBP07988 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SFTPBP07988 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SFTPBP07988 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.18□□□□□ -0.14
SFTPBP07988 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPBP07988 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SFTPBP07988 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SFTPBP07988 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SFTPBP07988 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SFTPBP07988 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.17□□□□□ -0.14
SFTPBP07988 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.17□□□□□ -0.14
SFTPBP07988 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
SFTPBP07988 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.17□□□□□ -0.14
SFTPBP07988 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SFTPBP07988 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.17□□□□□ -0.14
SFTPBP07988 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.17□□□□□ -0.14
SFTPBP07988 GGTLC5P-201ENST00000617623 998 ntBASIC14.17□□□□□ -0.14
SFTPBP07988 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.17□□□□□ -0.14
SFTPBP07988 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SFTPBP07988 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 AL353732.1-201ENST00000569618 1459 ntBASIC14.17□□□□□ -0.14
SFTPBP07988 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SFTPBP07988 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.17□□□□□ -0.14
SFTPBP07988 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SFTPBP07988 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.17□□□□□ -0.14
SFTPBP07988 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SFTPBP07988 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.17□□□□□ -0.14
SFTPBP07988 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.17□□□□□ -0.14
SFTPBP07988 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 PMS2P7-201ENST00000506558 1336 ntBASIC14.16□□□□□ -0.14
SFTPBP07988 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.16□□□□□ -0.14
SFTPBP07988 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.16□□□□□ -0.14
SFTPBP07988 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SFTPBP07988 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SFTPBP07988 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.16□□□□□ -0.14
SFTPBP07988 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.16□□□□□ -0.14
SFTPBP07988 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SFTPBP07988 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SFTPBP07988 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPBP07988 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms