Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN1P07384 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN1P07384 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.02■□□□□ 0.16
CAPN1P07384 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN1P07384 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN1P07384 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
CAPN1P07384 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN1P07384 AP000344.2-201ENST00000512987 629 ntBASIC16.02■□□□□ 0.16
CAPN1P07384 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.02■□□□□ 0.16
CAPN1P07384 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CAPN1P07384 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN1P07384 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN1P07384 AC105339.1-204ENST00000636249 355 ntBASIC16.02■□□□□ 0.16
CAPN1P07384 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN1P07384 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CAPN1P07384 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
CAPN1P07384 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 AC010491.1-201ENST00000563101 2797 ntBASIC16.02■□□□□ 0.15
CAPN1P07384 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN1P07384 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.02■□□□□ 0.15
CAPN1P07384 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CAPN1P07384 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN1P07384 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN1P07384 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CAPN1P07384 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 AL365209.1-201ENST00000624418 6473 ntBASIC16.01■□□□□ 0.15
CAPN1P07384 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN1P07384 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN1P07384 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 ADH5P3-201ENST00000433842 1137 ntBASIC16.01■□□□□ 0.15
CAPN1P07384 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN1P07384 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
CAPN1P07384 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CAPN1P07384 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN1P07384 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.01■□□□□ 0.15
CAPN1P07384 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
CAPN1P07384 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN1P07384 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CAPN1P07384 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN1P07384 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CAPN1P07384 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN1P07384 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16■□□□□ 0.15
CAPN1P07384 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16■□□□□ 0.15
CAPN1P07384 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms