Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A1P05023 AC006504.4-201ENST00000592118 1568 ntBASIC17.31■□□□□ 0.36
ATP1A1P05023 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ATP1A1P05023 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A1P05023 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP1A1P05023 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A1P05023 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A1P05023 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A1P05023 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A1P05023 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP1A1P05023 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP1A1P05023 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP1A1P05023 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 ELK2BP-201ENST00000415014 1224 ntBASIC17.3■□□□□ 0.36
ATP1A1P05023 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP1A1P05023 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.3■□□□□ 0.36
ATP1A1P05023 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP1A1P05023 RPS2P1-201ENST00000434010 821 ntBASIC17.3■□□□□ 0.36
ATP1A1P05023 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP1A1P05023 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 AC025062.2-201ENST00000605477 670 ntBASIC17.3■□□□□ 0.36
ATP1A1P05023 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP1A1P05023 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP1A1P05023 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ATP1A1P05023 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP1A1P05023 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 AL009178.2-201ENST00000597278 2719 ntBASIC17.29■□□□□ 0.36
ATP1A1P05023 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP1A1P05023 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP1A1P05023 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP1A1P05023 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ATP1A1P05023 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP1A1P05023 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP1A1P05023 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP1A1P05023 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP1A1P05023 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP1A1P05023 HCG4-201ENST00000418983 998 ntBASIC17.29■□□□□ 0.36
ATP1A1P05023 AL031284.1-201ENST00000419297 478 ntBASIC17.29■□□□□ 0.36
ATP1A1P05023 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP1A1P05023 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP1A1P05023 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP1A1P05023 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP1A1P05023 AP001005.1-201ENST00000571755 1248 ntBASIC17.29■□□□□ 0.36
ATP1A1P05023 AC005412.3-201ENST00000580309 715 ntBASIC17.29■□□□□ 0.36
ATP1A1P05023 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms