Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 PTCHD3P3-201ENST00000403073 906 ntBASIC13.66□□□□□ -0.22
CD74P04233 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 AC245100.5-201ENST00000452108 331 ntBASIC13.66□□□□□ -0.22
CD74P04233 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD74P04233 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.66□□□□□ -0.22
CD74P04233 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.66□□□□□ -0.22
CD74P04233 MIR5100-201ENST00000579544 119 ntBASIC13.66□□□□□ -0.22
CD74P04233 AC092329.2-201ENST00000598402 547 ntBASIC13.66□□□□□ -0.22
CD74P04233 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.66□□□□□ -0.22
CD74P04233 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.66□□□□□ -0.22
CD74P04233 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.66□□□□□ -0.22
CD74P04233 AC232323.1-201ENST00000540724 2099 ntBASIC13.66□□□□□ -0.22
CD74P04233 REXO1L5P-201ENST00000622260 2098 ntBASIC13.66□□□□□ -0.22
CD74P04233 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD74P04233 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.66□□□□□ -0.22
CD74P04233 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CD74P04233 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CD74P04233 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD74P04233 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.66□□□□□ -0.22
CD74P04233 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.66□□□□□ -0.22
CD74P04233 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD74P04233 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CD74P04233 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.65□□□□□ -0.22
CD74P04233 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.65□□□□□ -0.22
CD74P04233 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.65□□□□□ -0.22
CD74P04233 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 TSSC2-201ENST00000450217 709 ntBASIC13.65□□□□□ -0.22
CD74P04233 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.65□□□□□ -0.22
CD74P04233 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.65□□□□□ -0.22
CD74P04233 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.65□□□□□ -0.22
CD74P04233 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.65□□□□□ -0.22
CD74P04233 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.65□□□□□ -0.22
CD74P04233 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CD74P04233 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD74P04233 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CD74P04233 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CD74P04233 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CD74P04233 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CD74P04233 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.64□□□□□ -0.23
CD74P04233 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.64□□□□□ -0.23
CD74P04233 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 AGAP7P-201ENST00000582299 2062 ntBASIC13.64□□□□□ -0.23
CD74P04233 AGAP14-201ENST00000624701 2060 ntBASIC13.64□□□□□ -0.23
CD74P04233 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD74P04233 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms