Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RN7SL589P-201ENST00000481268 310 ntBASIC15.22■□□□□ 0.03
HCN1O60741 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.22■□□□□ 0.03
HCN1O60741 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 AC026120.1-201ENST00000611536 926 ntBASIC15.22■□□□□ 0.03
HCN1O60741 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.22■□□□□ 0.03
HCN1O60741 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HCN1O60741 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.22■□□□□ 0.03
HCN1O60741 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HCN1O60741 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.22■□□□□ 0.03
HCN1O60741 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.22■□□□□ 0.03
HCN1O60741 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCN1O60741 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.21■□□□□ 0.03
HCN1O60741 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.21■□□□□ 0.03
HCN1O60741 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HCN1O60741 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.21■□□□□ 0.03
HCN1O60741 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.21■□□□□ 0.03
HCN1O60741 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.21■□□□□ 0.03
HCN1O60741 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.21■□□□□ 0.03
HCN1O60741 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.21■□□□□ 0.03
HCN1O60741 ADH5P3-201ENST00000433842 1137 ntBASIC15.21■□□□□ 0.03
HCN1O60741 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.21■□□□□ 0.03
HCN1O60741 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.21■□□□□ 0.03
HCN1O60741 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.21■□□□□ 0.03
HCN1O60741 AC109635.5-201ENST00000533593 962 ntBASIC15.21■□□□□ 0.03
HCN1O60741 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.21■□□□□ 0.03
HCN1O60741 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HCN1O60741 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.21■□□□□ 0.03
HCN1O60741 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.21■□□□□ 0.03
HCN1O60741 AC099522.2-201ENST00000607001 744 ntBASIC15.21■□□□□ 0.03
HCN1O60741 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.21■□□□□ 0.03
HCN1O60741 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.21■□□□□ 0.03
HCN1O60741 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.21■□□□□ 0.03
HCN1O60741 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.21■□□□□ 0.03
HCN1O60741 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.21■□□□□ 0.03
HCN1O60741 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.21■□□□□ 0.03
HCN1O60741 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCN1O60741 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCN1O60741 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCN1O60741 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
HCN1O60741 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCN1O60741 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.21■□□□□ 0.02
HCN1O60741 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCN1O60741 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.21■□□□□ 0.02
HCN1O60741 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCN1O60741 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCN1O60741 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCN1O60741 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCN1O60741 AC099063.4-201ENST00000641099 1602 ntBASIC15.21■□□□□ 0.02
HCN1O60741 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCN1O60741 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
HCN1O60741 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.2■□□□□ 0.02
HCN1O60741 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
HCN1O60741 AKAP8P1-201ENST00000434743 1349 ntBASIC15.2■□□□□ 0.02
HCN1O60741 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HCN1O60741 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.2■□□□□ 0.02
HCN1O60741 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 GGT3P-204ENST00000453783 1664 ntBASIC15.2■□□□□ 0.02
HCN1O60741 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.2■□□□□ 0.02
HCN1O60741 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.2■□□□□ 0.02
HCN1O60741 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.2■□□□□ 0.02
HCN1O60741 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.2■□□□□ 0.02
HCN1O60741 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 AC004461.1-201ENST00000412461 403 ntBASIC15.2■□□□□ 0.02
HCN1O60741 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms