Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.62□□□□□ -0.39
PDE6DO43924 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.62□□□□□ -0.39
PDE6DO43924 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 LINC00552-201ENST00000625151 2579 ntBASIC12.61□□□□□ -0.39
PDE6DO43924 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 LINC00982-205ENST00000420957 435 ntBASIC12.61□□□□□ -0.39
PDE6DO43924 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 AC092597.1-201ENST00000487352 616 ntBASIC12.61□□□□□ -0.39
PDE6DO43924 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.61□□□□□ -0.39
PDE6DO43924 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.61□□□□□ -0.39
PDE6DO43924 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.61□□□□□ -0.39
PDE6DO43924 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.61□□□□□ -0.39
PDE6DO43924 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.61□□□□□ -0.39
PDE6DO43924 AC142381.4-202ENST00000563973 229 ntBASIC12.61□□□□□ -0.39
PDE6DO43924 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.61□□□□□ -0.39
PDE6DO43924 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.61□□□□□ -0.39
PDE6DO43924 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.61□□□□□ -0.39
PDE6DO43924 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.61□□□□□ -0.39
PDE6DO43924 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.61□□□□□ -0.39
PDE6DO43924 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PDE6DO43924 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
PDE6DO43924 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.6□□□□□ -0.39
PDE6DO43924 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.6□□□□□ -0.39
PDE6DO43924 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.6□□□□□ -0.39
PDE6DO43924 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.6□□□□□ -0.39
PDE6DO43924 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
PDE6DO43924 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.6□□□□□ -0.39
PDE6DO43924 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PDE6DO43924 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.6□□□□□ -0.39
PDE6DO43924 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.6□□□□□ -0.39
PDE6DO43924 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms