Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF3IP2O43734 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAF3IP2O43734 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.45□□□□□ -0.1
TRAF3IP2O43734 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 HLA-H-201ENST00000383620 1096 ntBASIC14.45□□□□□ -0.1
TRAF3IP2O43734 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 AP000344.2-201ENST00000512987 629 ntBASIC14.45□□□□□ -0.1
TRAF3IP2O43734 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 AC093520.2-201ENST00000561830 333 ntBASIC14.45□□□□□ -0.1
TRAF3IP2O43734 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 AC024267.1-201ENST00000582320 895 ntBASIC14.45□□□□□ -0.1
TRAF3IP2O43734 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.45□□□□□ -0.1
TRAF3IP2O43734 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAF3IP2O43734 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AC112504.1-201ENST00000623415 1841 ntBASIC14.44□□□□□ -0.1
TRAF3IP2O43734 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AC211486.1-202ENST00000416371 468 ntBASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AL627223.1-201ENST00000416693 442 ntBASIC14.44□□□□□ -0.1
TRAF3IP2O43734 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AC005237.2-201ENST00000434368 219 ntBASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AC211476.1-201ENST00000503899 468 ntBASIC14.44□□□□□ -0.1
TRAF3IP2O43734 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 RNA5SP410-201ENST00000516285 106 ntBASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 AC055717.3-201ENST00000622967 595 ntBASIC14.44□□□□□ -0.1
TRAF3IP2O43734 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAF3IP2O43734 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms