Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PHGDHO43175 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.17■□□□□ 0.18
PHGDHO43175 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHGDHO43175 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.17■□□□□ 0.18
PHGDHO43175 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.17■□□□□ 0.18
PHGDHO43175 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PHGDHO43175 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PHGDHO43175 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PHGDHO43175 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.16■□□□□ 0.18
PHGDHO43175 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PHGDHO43175 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.16■□□□□ 0.18
PHGDHO43175 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.16■□□□□ 0.18
PHGDHO43175 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 AC023141.13-201ENST00000604991 943 ntBASIC16.16■□□□□ 0.18
PHGDHO43175 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.16■□□□□ 0.18
PHGDHO43175 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 AC104640.1-201ENST00000562617 2109 ntBASIC16.16■□□□□ 0.18
PHGDHO43175 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.16■□□□□ 0.18
PHGDHO43175 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 HLA-A-201ENST00000376802 1334 ntBASIC16.16■□□□□ 0.18
PHGDHO43175 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.16■□□□□ 0.18
PHGDHO43175 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
PHGDHO43175 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.16■□□□□ 0.18
PHGDHO43175 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
PHGDHO43175 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHGDHO43175 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 AC126177.1-201ENST00000547829 2218 ntBASIC16.15■□□□□ 0.18
PHGDHO43175 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.15■□□□□ 0.18
PHGDHO43175 AC092850.2-201ENST00000623821 2697 ntBASIC16.15■□□□□ 0.18
PHGDHO43175 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.15■□□□□ 0.18
PHGDHO43175 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.15■□□□□ 0.18
PHGDHO43175 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PHGDHO43175 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PHGDHO43175 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.15■□□□□ 0.18
PHGDHO43175 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.15■□□□□ 0.18
PHGDHO43175 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.15■□□□□ 0.18
PHGDHO43175 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.15■□□□□ 0.18
PHGDHO43175 KRT18P34-201ENST00000488218 1270 ntBASIC16.15■□□□□ 0.18
PHGDHO43175 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.15■□□□□ 0.18
PHGDHO43175 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.15■□□□□ 0.18
PHGDHO43175 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.15■□□□□ 0.18
PHGDHO43175 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.15■□□□□ 0.18
PHGDHO43175 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.15■□□□□ 0.18
PHGDHO43175 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
PHGDHO43175 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.15■□□□□ 0.18
PHGDHO43175 AC025580.3-201ENST00000617932 1424 ntBASIC16.15■□□□□ 0.18
PHGDHO43175 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.15■□□□□ 0.18
PHGDHO43175 AC007064.4-201ENST00000637740 555 ntBASIC16.15■□□□□ 0.18
PHGDHO43175 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PHGDHO43175 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms