Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC104640.1-201ENST00000562617 2109 ntBASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC093525.9-201ENST00000624961 1746 ntBASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 CYP2A7P1-201ENST00000595391 815 ntBASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TMX2-CTNND1H3BSU7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC027369.6-201ENST00000525520 931 ntBASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC073389.1-201ENST00000595595 795 ntBASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TMX2-CTNND1H3BSU7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TMX2-CTNND1H3BSU7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TMX2-CTNND1H3BSU7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TMX2-CTNND1H3BSU7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
TMX2-CTNND1H3BSU7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 RARRES2P9-201ENST00000565168 469 ntBASIC15.95■□□□□ 0.14
TMX2-CTNND1H3BSU7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms