Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01546A6NGU7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 REXO1L2P-201ENST00000425429 2069 ntBASIC11.42□□□□□ -0.58
LINC01546A6NGU7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 AC127383.1-201ENST00000444697 1800 ntBASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 RCN1P2-201ENST00000398357 915 ntBASIC11.42□□□□□ -0.58
LINC01546A6NGU7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 TSPY15P-201ENST00000457163 923 ntBASIC11.42□□□□□ -0.58
LINC01546A6NGU7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 AC008550.1-201ENST00000511500 884 ntBASIC11.42□□□□□ -0.58
LINC01546A6NGU7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.42□□□□□ -0.58
LINC01546A6NGU7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01546A6NGU7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 AL359881.3-201ENST00000602640 1721 ntBASIC11.41□□□□□ -0.58
LINC01546A6NGU7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms