Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCDHGB1Q9Y5G3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHGB1Q9Y5G3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 SLC6A10P-202ENST00000431994 2058 ntBASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB1Q9Y5G3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB1Q9Y5G3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDHGB1Q9Y5G3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGB1Q9Y5G3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB1Q9Y5G3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDHGB1Q9Y5G3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHGB1Q9Y5G3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB1Q9Y5G3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PCDHGB1Q9Y5G3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB1Q9Y5G3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB1Q9Y5G3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB1Q9Y5G3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB1Q9Y5G3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB1Q9Y5G3 AC008813.1-201ENST00000536597 885 ntBASIC21.49■■□□□ 1.03
PCDHGB1Q9Y5G3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGB1Q9Y5G3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 MIR4449-201ENST00000578365 66 ntBASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB1Q9Y5G3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB1Q9Y5G3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGB1Q9Y5G3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB1Q9Y5G3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB1Q9Y5G3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB1Q9Y5G3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB1Q9Y5G3 AC004812.2-201ENST00000611079 2094 ntBASIC21.47■■□□□ 1.03
PCDHGB1Q9Y5G3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB1Q9Y5G3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 AL117328.2-201ENST00000624617 1940 ntBASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB1Q9Y5G3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB1Q9Y5G3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB1Q9Y5G3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGB1Q9Y5G3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB1Q9Y5G3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PCDHGB1Q9Y5G3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB1Q9Y5G3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB1Q9Y5G3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB1Q9Y5G3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB1Q9Y5G3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB1Q9Y5G3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB1Q9Y5G3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB1Q9Y5G3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB1Q9Y5G3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB1Q9Y5G3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB1Q9Y5G3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB1Q9Y5G3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB1Q9Y5G3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB1Q9Y5G3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PCDHGB1Q9Y5G3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB1Q9Y5G3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB1Q9Y5G3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB1Q9Y5G3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCDHGB1Q9Y5G3 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.42■■□□□ 1.02
PCDHGB1Q9Y5G3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PCDHGB1Q9Y5G3 AC148477.6-201ENST00000623746 465 ntBASIC21.42■■□□□ 1.02
PCDHGB1Q9Y5G3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB1Q9Y5G3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB1Q9Y5G3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB1Q9Y5G3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
PCDHGB1Q9Y5G3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB1Q9Y5G3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB1Q9Y5G3 MIR639-201ENST00000384974 98 ntBASIC21.41■■□□□ 1.02
PCDHGB1Q9Y5G3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGB1Q9Y5G3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms