Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM2Q9Y333 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM2Q9Y333 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
LSM2Q9Y333 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM2Q9Y333 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LSM2Q9Y333 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LSM2Q9Y333 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.01■□□□□ 0.95
LSM2Q9Y333 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM2Q9Y333 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM2Q9Y333 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LSM2Q9Y333 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21■□□□□ 0.95
LSM2Q9Y333 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM2Q9Y333 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LSM2Q9Y333 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LSM2Q9Y333 MIR6089-201ENST00000616698 64 ntBASIC21■□□□□ 0.95
LSM2Q9Y333 CHML-204ENST00000638121 920 ntTSL 2 BASIC21■□□□□ 0.95
LSM2Q9Y333 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM2Q9Y333 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LSM2Q9Y333 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM2Q9Y333 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM2Q9Y333 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21■□□□□ 0.95
LSM2Q9Y333 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21■□□□□ 0.95
LSM2Q9Y333 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LSM2Q9Y333 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LSM2Q9Y333 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM2Q9Y333 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM2Q9Y333 AC044849.2-201ENST00000606596 710 ntBASIC20.99■□□□□ 0.95
LSM2Q9Y333 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LSM2Q9Y333 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM2Q9Y333 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LSM2Q9Y333 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM2Q9Y333 AC008813.1-201ENST00000536597 885 ntBASIC20.98■□□□□ 0.95
LSM2Q9Y333 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.97■□□□□ 0.95
LSM2Q9Y333 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM2Q9Y333 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LSM2Q9Y333 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LSM2Q9Y333 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM2Q9Y333 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM2Q9Y333 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM2Q9Y333 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LSM2Q9Y333 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.96■□□□□ 0.95
LSM2Q9Y333 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.96■□□□□ 0.95
LSM2Q9Y333 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LSM2Q9Y333 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.96■□□□□ 0.95
LSM2Q9Y333 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LSM2Q9Y333 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LSM2Q9Y333 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LSM2Q9Y333 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSM2Q9Y333 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.95■□□□□ 0.95
LSM2Q9Y333 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.95■□□□□ 0.94
LSM2Q9Y333 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LSM2Q9Y333 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM2Q9Y333 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM2Q9Y333 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM2Q9Y333 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LSM2Q9Y333 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM2Q9Y333 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.95■□□□□ 0.94
LSM2Q9Y333 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
LSM2Q9Y333 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.95■□□□□ 0.94
LSM2Q9Y333 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
LSM2Q9Y333 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM2Q9Y333 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.95■□□□□ 0.94
LSM2Q9Y333 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM2Q9Y333 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM2Q9Y333 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LSM2Q9Y333 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LSM2Q9Y333 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LSM2Q9Y333 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LSM2Q9Y333 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.94■□□□□ 0.94
LSM2Q9Y333 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LSM2Q9Y333 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM2Q9Y333 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM2Q9Y333 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LSM2Q9Y333 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LSM2Q9Y333 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM2Q9Y333 DUX4L29-201ENST00000425409 679 ntBASIC20.93■□□□□ 0.94
LSM2Q9Y333 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LSM2Q9Y333 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSM2Q9Y333 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.92■□□□□ 0.94
LSM2Q9Y333 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM2Q9Y333 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM2Q9Y333 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LSM2Q9Y333 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM2Q9Y333 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.92■□□□□ 0.94
LSM2Q9Y333 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSM2Q9Y333 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.92■□□□□ 0.94
LSM2Q9Y333 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM2Q9Y333 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM2Q9Y333 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSM2Q9Y333 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM2Q9Y333 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSM2Q9Y333 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM2Q9Y333 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSM2Q9Y333 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM2Q9Y333 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LSM2Q9Y333 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSM2Q9Y333 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.91■□□□□ 0.94
LSM2Q9Y333 AL117328.2-201ENST00000624617 1940 ntBASIC20.91■□□□□ 0.94
LSM2Q9Y333 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM2Q9Y333 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms