Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIN7CQ9NUP9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LIN7CQ9NUP9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIN7CQ9NUP9 MIR3960-201ENST00000583311 91 ntBASIC19.48■□□□□ 0.71
LIN7CQ9NUP9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIN7CQ9NUP9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIN7CQ9NUP9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LIN7CQ9NUP9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIN7CQ9NUP9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIN7CQ9NUP9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIN7CQ9NUP9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.47■□□□□ 0.71
LIN7CQ9NUP9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIN7CQ9NUP9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LIN7CQ9NUP9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.47■□□□□ 0.71
LIN7CQ9NUP9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.47■□□□□ 0.71
LIN7CQ9NUP9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LIN7CQ9NUP9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN7CQ9NUP9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN7CQ9NUP9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
LIN7CQ9NUP9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN7CQ9NUP9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.46■□□□□ 0.71
LIN7CQ9NUP9 AC007029.1-201ENST00000604183 313 ntBASIC19.46■□□□□ 0.71
LIN7CQ9NUP9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LIN7CQ9NUP9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN7CQ9NUP9 SLC6A10P-202ENST00000431994 2058 ntBASIC19.45■□□□□ 0.7
LIN7CQ9NUP9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LIN7CQ9NUP9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN7CQ9NUP9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LIN7CQ9NUP9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LIN7CQ9NUP9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.45■□□□□ 0.7
LIN7CQ9NUP9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN7CQ9NUP9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN7CQ9NUP9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LIN7CQ9NUP9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN7CQ9NUP9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LIN7CQ9NUP9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN7CQ9NUP9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN7CQ9NUP9 RP9P-202ENST00000450133 1212 ntBASIC19.43■□□□□ 0.7
LIN7CQ9NUP9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN7CQ9NUP9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN7CQ9NUP9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN7CQ9NUP9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN7CQ9NUP9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.43■□□□□ 0.7
LIN7CQ9NUP9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 AC141586.4-201ENST00000624558 1573 ntBASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 ABHD17AP5-201ENST00000580133 923 ntBASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIN7CQ9NUP9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 LINC00543-201ENST00000567234 1845 ntBASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LIN7CQ9NUP9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
LIN7CQ9NUP9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LIN7CQ9NUP9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LIN7CQ9NUP9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LIN7CQ9NUP9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LIN7CQ9NUP9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LIN7CQ9NUP9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIN7CQ9NUP9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIN7CQ9NUP9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.39■□□□□ 0.69
LIN7CQ9NUP9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIN7CQ9NUP9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIN7CQ9NUP9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms