Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLE3Q9NRF9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.86■■□□□ 1.09
POLE3Q9NRF9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.86■■□□□ 1.09
POLE3Q9NRF9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
POLE3Q9NRF9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.86■■□□□ 1.09
POLE3Q9NRF9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.85■■□□□ 1.09
POLE3Q9NRF9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLE3Q9NRF9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLE3Q9NRF9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.85■■□□□ 1.09
POLE3Q9NRF9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLE3Q9NRF9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POLE3Q9NRF9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLE3Q9NRF9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
POLE3Q9NRF9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.84■■□□□ 1.09
POLE3Q9NRF9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
POLE3Q9NRF9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.84■■□□□ 1.09
POLE3Q9NRF9 AL592293.1-201ENST00000502889 1188 ntBASIC21.84■■□□□ 1.09
POLE3Q9NRF9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.84■■□□□ 1.09
POLE3Q9NRF9 MIR6089-201ENST00000616698 64 ntBASIC21.84■■□□□ 1.09
POLE3Q9NRF9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POLE3Q9NRF9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.84■■□□□ 1.09
POLE3Q9NRF9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
POLE3Q9NRF9 AC018755.3-202ENST00000596210 929 ntBASIC21.83■■□□□ 1.09
POLE3Q9NRF9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
POLE3Q9NRF9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLE3Q9NRF9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.83■■□□□ 1.08
POLE3Q9NRF9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLE3Q9NRF9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLE3Q9NRF9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.82■■□□□ 1.08
POLE3Q9NRF9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLE3Q9NRF9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLE3Q9NRF9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLE3Q9NRF9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLE3Q9NRF9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLE3Q9NRF9 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.82■■□□□ 1.08
POLE3Q9NRF9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLE3Q9NRF9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.81■■□□□ 1.08
POLE3Q9NRF9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.81■■□□□ 1.08
POLE3Q9NRF9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLE3Q9NRF9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLE3Q9NRF9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLE3Q9NRF9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.79■■□□□ 1.08
POLE3Q9NRF9 RPS2P7-201ENST00000447334 885 ntBASIC21.79■■□□□ 1.08
POLE3Q9NRF9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
POLE3Q9NRF9 AL139125.2-201ENST00000623134 1869 ntBASIC21.79■■□□□ 1.08
POLE3Q9NRF9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.78■■□□□ 1.08
POLE3Q9NRF9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.78■■□□□ 1.08
POLE3Q9NRF9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.78■■□□□ 1.08
POLE3Q9NRF9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLE3Q9NRF9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLE3Q9NRF9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLE3Q9NRF9 FOXO3B-201ENST00000395675 1928 ntBASIC21.78■■□□□ 1.08
POLE3Q9NRF9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLE3Q9NRF9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLE3Q9NRF9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLE3Q9NRF9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLE3Q9NRF9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
POLE3Q9NRF9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLE3Q9NRF9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POLE3Q9NRF9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLE3Q9NRF9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
POLE3Q9NRF9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLE3Q9NRF9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.76■■□□□ 1.07
POLE3Q9NRF9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLE3Q9NRF9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.76■■□□□ 1.07
POLE3Q9NRF9 SPCS2P3-201ENST00000500401 656 ntBASIC21.76■■□□□ 1.07
POLE3Q9NRF9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.76■■□□□ 1.07
POLE3Q9NRF9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
POLE3Q9NRF9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.76■■□□□ 1.07
POLE3Q9NRF9 MIR6765-201ENST00000614092 87 ntBASIC21.76■■□□□ 1.07
POLE3Q9NRF9 U85056.1-201ENST00000616429 682 ntBASIC21.76■■□□□ 1.07
POLE3Q9NRF9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLE3Q9NRF9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLE3Q9NRF9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
POLE3Q9NRF9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.75■■□□□ 1.07
POLE3Q9NRF9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
POLE3Q9NRF9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.75■■□□□ 1.07
POLE3Q9NRF9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.75■■□□□ 1.07
POLE3Q9NRF9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLE3Q9NRF9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLE3Q9NRF9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
POLE3Q9NRF9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLE3Q9NRF9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.74■■□□□ 1.07
POLE3Q9NRF9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLE3Q9NRF9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.74■■□□□ 1.07
POLE3Q9NRF9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.73■■□□□ 1.07
POLE3Q9NRF9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.73■■□□□ 1.07
POLE3Q9NRF9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.73■■□□□ 1.07
POLE3Q9NRF9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.73■■□□□ 1.07
POLE3Q9NRF9 DUX4L9-201ENST00000449051 1259 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms