Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.08■□□□□ 0.81
GCM1Q9NP62 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GCM1Q9NP62 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GCM1Q9NP62 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.08■□□□□ 0.8
GCM1Q9NP62 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
GCM1Q9NP62 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
GCM1Q9NP62 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GCM1Q9NP62 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
GCM1Q9NP62 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.06■□□□□ 0.8
GCM1Q9NP62 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCM1Q9NP62 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GCM1Q9NP62 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCM1Q9NP62 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.05■□□□□ 0.8
GCM1Q9NP62 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCM1Q9NP62 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCM1Q9NP62 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCM1Q9NP62 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GCM1Q9NP62 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCM1Q9NP62 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCM1Q9NP62 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCM1Q9NP62 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCM1Q9NP62 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCM1Q9NP62 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
GCM1Q9NP62 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GCM1Q9NP62 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GCM1Q9NP62 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GCM1Q9NP62 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.02■□□□□ 0.8
GCM1Q9NP62 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GCM1Q9NP62 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GCM1Q9NP62 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GCM1Q9NP62 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.02■□□□□ 0.79
GCM1Q9NP62 KRT8P33-201ENST00000508125 1423 ntBASIC20.02■□□□□ 0.79
GCM1Q9NP62 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GCM1Q9NP62 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GCM1Q9NP62 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GCM1Q9NP62 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.01■□□□□ 0.79
GCM1Q9NP62 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GCM1Q9NP62 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.01■□□□□ 0.79
GCM1Q9NP62 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GCM1Q9NP62 MIR4508-201ENST00000584178 70 ntBASIC20.01■□□□□ 0.79
GCM1Q9NP62 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GCM1Q9NP62 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GCM1Q9NP62 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20■□□□□ 0.79
GCM1Q9NP62 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20■□□□□ 0.79
GCM1Q9NP62 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20■□□□□ 0.79
GCM1Q9NP62 AC103834.1-201ENST00000520383 144 ntBASIC20■□□□□ 0.79
GCM1Q9NP62 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GCM1Q9NP62 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20■□□□□ 0.79
GCM1Q9NP62 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20■□□□□ 0.79
GCM1Q9NP62 FOXO3B-201ENST00000395675 1928 ntBASIC20■□□□□ 0.79
GCM1Q9NP62 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20■□□□□ 0.79
GCM1Q9NP62 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GCM1Q9NP62 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GCM1Q9NP62 YBX1P4-201ENST00000392794 808 ntBASIC19.99■□□□□ 0.79
GCM1Q9NP62 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
GCM1Q9NP62 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
GCM1Q9NP62 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GCM1Q9NP62 AC022616.5-201ENST00000518796 181 ntBASIC19.99■□□□□ 0.79
GCM1Q9NP62 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
GCM1Q9NP62 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.99■□□□□ 0.79
GCM1Q9NP62 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.99■□□□□ 0.79
GCM1Q9NP62 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GCM1Q9NP62 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GCM1Q9NP62 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
GCM1Q9NP62 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GCM1Q9NP62 AL592295.1-201ENST00000400984 884 ntBASIC19.98■□□□□ 0.79
GCM1Q9NP62 RARRES2P1-201ENST00000474487 481 ntBASIC19.98■□□□□ 0.79
GCM1Q9NP62 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.98■□□□□ 0.79
GCM1Q9NP62 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.98■□□□□ 0.79
GCM1Q9NP62 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.98■□□□□ 0.79
GCM1Q9NP62 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GCM1Q9NP62 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GCM1Q9NP62 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
GCM1Q9NP62 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GCM1Q9NP62 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.97■□□□□ 0.79
GCM1Q9NP62 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
GCM1Q9NP62 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
GCM1Q9NP62 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.97■□□□□ 0.79
GCM1Q9NP62 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GCM1Q9NP62 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GCM1Q9NP62 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.97■□□□□ 0.79
GCM1Q9NP62 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.97■□□□□ 0.79
GCM1Q9NP62 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GCM1Q9NP62 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GCM1Q9NP62 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
GCM1Q9NP62 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GCM1Q9NP62 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GCM1Q9NP62 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GCM1Q9NP62 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GCM1Q9NP62 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.96■□□□□ 0.79
GCM1Q9NP62 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms