Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.57■■□□□ 1.68
RC3H2Q9HBD1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H2Q9HBD1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.56■■□□□ 1.68
RC3H2Q9HBD1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H2Q9HBD1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H2Q9HBD1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H2Q9HBD1 AC096631.2-201ENST00000436136 790 ntBASIC25.56■■□□□ 1.68
RC3H2Q9HBD1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.56■■□□□ 1.68
RC3H2Q9HBD1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H2Q9HBD1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RC3H2Q9HBD1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H2Q9HBD1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
RC3H2Q9HBD1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H2Q9HBD1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.55■■□□□ 1.68
RC3H2Q9HBD1 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.55■■□□□ 1.68
RC3H2Q9HBD1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
RC3H2Q9HBD1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 AC005837.3-201ENST00000612163 286 ntBASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RC3H2Q9HBD1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
RC3H2Q9HBD1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H2Q9HBD1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.53■■□□□ 1.68
RC3H2Q9HBD1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H2Q9HBD1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.52■■□□□ 1.68
RC3H2Q9HBD1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H2Q9HBD1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H2Q9HBD1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H2Q9HBD1 AC133561.4-201ENST00000566112 224 ntBASIC25.52■■□□□ 1.68
RC3H2Q9HBD1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H2Q9HBD1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H2Q9HBD1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H2Q9HBD1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.51■■□□□ 1.67
RC3H2Q9HBD1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H2Q9HBD1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H2Q9HBD1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.51■■□□□ 1.67
RC3H2Q9HBD1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H2Q9HBD1 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.5■■□□□ 1.67
RC3H2Q9HBD1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
RC3H2Q9HBD1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.5■■□□□ 1.67
RC3H2Q9HBD1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RC3H2Q9HBD1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RC3H2Q9HBD1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RC3H2Q9HBD1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H2Q9HBD1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H2Q9HBD1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H2Q9HBD1 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.48■■□□□ 1.67
RC3H2Q9HBD1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.48■■□□□ 1.67
RC3H2Q9HBD1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H2Q9HBD1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H2Q9HBD1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.47■■□□□ 1.67
RC3H2Q9HBD1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.47■■□□□ 1.67
RC3H2Q9HBD1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RC3H2Q9HBD1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H2Q9HBD1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H2Q9HBD1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H2Q9HBD1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.46■■□□□ 1.67
RC3H2Q9HBD1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.46■■□□□ 1.67
RC3H2Q9HBD1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.46■■□□□ 1.67
RC3H2Q9HBD1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
RC3H2Q9HBD1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
RC3H2Q9HBD1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RC3H2Q9HBD1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RC3H2Q9HBD1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RC3H2Q9HBD1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H2Q9HBD1 FOXO3B-201ENST00000395675 1928 ntBASIC25.44■■□□□ 1.66
RC3H2Q9HBD1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H2Q9HBD1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.44■■□□□ 1.66
RC3H2Q9HBD1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.44■■□□□ 1.66
RC3H2Q9HBD1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H2Q9HBD1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.44■■□□□ 1.66
RC3H2Q9HBD1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H2Q9HBD1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.43■■□□□ 1.66
RC3H2Q9HBD1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.43■■□□□ 1.66
RC3H2Q9HBD1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RC3H2Q9HBD1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.42■■□□□ 1.66
RC3H2Q9HBD1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
RC3H2Q9HBD1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RC3H2Q9HBD1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RC3H2Q9HBD1 SNX5-217ENST00000606557 1087 ntBASIC25.42■■□□□ 1.66
RC3H2Q9HBD1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.42■■□□□ 1.66
RC3H2Q9HBD1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RC3H2Q9HBD1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
RC3H2Q9HBD1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RC3H2Q9HBD1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RC3H2Q9HBD1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RC3H2Q9HBD1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RC3H2Q9HBD1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.41■■□□□ 1.66
RC3H2Q9HBD1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RC3H2Q9HBD1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RC3H2Q9HBD1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RC3H2Q9HBD1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RC3H2Q9HBD1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
RC3H2Q9HBD1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms