Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.76■■■□□ 2.36
CHMP4BQ9H444 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.76■■■□□ 2.35
CHMP4BQ9H444 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.76■■■□□ 2.35
CHMP4BQ9H444 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CHMP4BQ9H444 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CHMP4BQ9H444 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.75■■■□□ 2.35
CHMP4BQ9H444 AC087393.1-201ENST00000582896 145 ntBASIC29.75■■■□□ 2.35
CHMP4BQ9H444 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHMP4BQ9H444 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHMP4BQ9H444 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CHMP4BQ9H444 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC29.74■■■□□ 2.35
CHMP4BQ9H444 DUX4L9-201ENST00000449051 1259 ntBASIC29.74■■■□□ 2.35
CHMP4BQ9H444 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CHMP4BQ9H444 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.74■■■□□ 2.35
CHMP4BQ9H444 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHMP4BQ9H444 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHMP4BQ9H444 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CHMP4BQ9H444 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
CHMP4BQ9H444 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CHMP4BQ9H444 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC29.73■■■□□ 2.35
CHMP4BQ9H444 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHMP4BQ9H444 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CHMP4BQ9H444 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CHMP4BQ9H444 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CHMP4BQ9H444 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHMP4BQ9H444 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHMP4BQ9H444 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.71■■■□□ 2.35
CHMP4BQ9H444 AC129492.7-201ENST00000622992 756 ntBASIC29.71■■■□□ 2.35
CHMP4BQ9H444 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CHMP4BQ9H444 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.71■■■□□ 2.35
CHMP4BQ9H444 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHMP4BQ9H444 AL139125.2-201ENST00000623134 1869 ntBASIC29.7■■■□□ 2.35
CHMP4BQ9H444 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CHMP4BQ9H444 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CHMP4BQ9H444 NTF6A-201ENST00000591175 560 ntBASIC29.7■■■□□ 2.35
CHMP4BQ9H444 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CHMP4BQ9H444 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CHMP4BQ9H444 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.69■■■□□ 2.34
CHMP4BQ9H444 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHMP4BQ9H444 KRT18P60-201ENST00000312876 1297 ntBASIC29.69■■■□□ 2.34
CHMP4BQ9H444 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CHMP4BQ9H444 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHMP4BQ9H444 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHMP4BQ9H444 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.68■■■□□ 2.34
CHMP4BQ9H444 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.68■■■□□ 2.34
CHMP4BQ9H444 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.68■■■□□ 2.34
CHMP4BQ9H444 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC29.68■■■□□ 2.34
CHMP4BQ9H444 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.67■■■□□ 2.34
CHMP4BQ9H444 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHMP4BQ9H444 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CHMP4BQ9H444 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.67■■■□□ 2.34
CHMP4BQ9H444 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHMP4BQ9H444 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHMP4BQ9H444 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.67■■■□□ 2.34
CHMP4BQ9H444 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.67■■■□□ 2.34
CHMP4BQ9H444 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
CHMP4BQ9H444 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
CHMP4BQ9H444 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC29.66■■■□□ 2.34
CHMP4BQ9H444 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC29.65■■■□□ 2.34
CHMP4BQ9H444 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
CHMP4BQ9H444 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC29.65■■■□□ 2.34
CHMP4BQ9H444 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CHMP4BQ9H444 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CHMP4BQ9H444 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
CHMP4BQ9H444 AC135731.1-201ENST00000569415 2548 ntBASIC29.64■■■□□ 2.34
CHMP4BQ9H444 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CHMP4BQ9H444 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CHMP4BQ9H444 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.33
CHMP4BQ9H444 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CHMP4BQ9H444 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC29.63■■■□□ 2.33
CHMP4BQ9H444 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CHMP4BQ9H444 AL592295.1-201ENST00000400984 884 ntBASIC29.63■■■□□ 2.33
CHMP4BQ9H444 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC29.63■■■□□ 2.33
CHMP4BQ9H444 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CHMP4BQ9H444 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CHMP4BQ9H444 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CHMP4BQ9H444 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CHMP4BQ9H444 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CHMP4BQ9H444 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CHMP4BQ9H444 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CHMP4BQ9H444 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CHMP4BQ9H444 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CHMP4BQ9H444 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.61■■■□□ 2.33
CHMP4BQ9H444 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
CHMP4BQ9H444 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.61■■■□□ 2.33
CHMP4BQ9H444 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CHMP4BQ9H444 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
CHMP4BQ9H444 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.6■■■□□ 2.33
CHMP4BQ9H444 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
CHMP4BQ9H444 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CHMP4BQ9H444 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CHMP4BQ9H444 AC141586.4-201ENST00000624558 1573 ntBASIC29.6■■■□□ 2.33
CHMP4BQ9H444 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CHMP4BQ9H444 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
CHMP4BQ9H444 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CHMP4BQ9H444 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
CHMP4BQ9H444 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.59■■■□□ 2.33
CHMP4BQ9H444 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CHMP4BQ9H444 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CHMP4BQ9H444 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms