Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42EP4Q9H3Q1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42EP4Q9H3Q1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CDC42EP4Q9H3Q1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.05■■□□□ 1.44
CDC42EP4Q9H3Q1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.05■■□□□ 1.44
CDC42EP4Q9H3Q1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42EP4Q9H3Q1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.05■■□□□ 1.44
CDC42EP4Q9H3Q1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42EP4Q9H3Q1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42EP4Q9H3Q1 RPS2P35-201ENST00000443417 897 ntBASIC24.04■■□□□ 1.44
CDC42EP4Q9H3Q1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.04■■□□□ 1.44
CDC42EP4Q9H3Q1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CDC42EP4Q9H3Q1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
CDC42EP4Q9H3Q1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42EP4Q9H3Q1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42EP4Q9H3Q1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42EP4Q9H3Q1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.03■■□□□ 1.44
CDC42EP4Q9H3Q1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42EP4Q9H3Q1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42EP4Q9H3Q1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42EP4Q9H3Q1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42EP4Q9H3Q1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CDC42EP4Q9H3Q1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDC42EP4Q9H3Q1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CDC42EP4Q9H3Q1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CDC42EP4Q9H3Q1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CDC42EP4Q9H3Q1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.02■■□□□ 1.44
CDC42EP4Q9H3Q1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDC42EP4Q9H3Q1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.01■■□□□ 1.43
CDC42EP4Q9H3Q1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.01■■□□□ 1.43
CDC42EP4Q9H3Q1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42EP4Q9H3Q1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CDC42EP4Q9H3Q1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42EP4Q9H3Q1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42EP4Q9H3Q1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 DUSP8P5-201ENST00000422884 1815 ntBASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.99■■□□□ 1.43
CDC42EP4Q9H3Q1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 ABCB10P4-201ENST00000566803 2184 ntBASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 MIR6089-201ENST00000616698 64 ntBASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 CR559946.2-201ENST00000623684 991 ntBASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.98■■□□□ 1.43
CDC42EP4Q9H3Q1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42EP4Q9H3Q1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42EP4Q9H3Q1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.97■■□□□ 1.43
CDC42EP4Q9H3Q1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.97■■□□□ 1.43
CDC42EP4Q9H3Q1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.97■■□□□ 1.43
CDC42EP4Q9H3Q1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42EP4Q9H3Q1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.97■■□□□ 1.43
CDC42EP4Q9H3Q1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CDC42EP4Q9H3Q1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42EP4Q9H3Q1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.96■■□□□ 1.43
CDC42EP4Q9H3Q1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.96■■□□□ 1.43
CDC42EP4Q9H3Q1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42EP4Q9H3Q1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42EP4Q9H3Q1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42EP4Q9H3Q1 ZNRF2P2-203ENST00000454624 420 ntBASIC23.96■■□□□ 1.43
CDC42EP4Q9H3Q1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42EP4Q9H3Q1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CDC42EP4Q9H3Q1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42EP4Q9H3Q1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42EP4Q9H3Q1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.95■■□□□ 1.42
CDC42EP4Q9H3Q1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42EP4Q9H3Q1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42EP4Q9H3Q1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.94■■□□□ 1.42
CDC42EP4Q9H3Q1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.94■■□□□ 1.42
CDC42EP4Q9H3Q1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42EP4Q9H3Q1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42EP4Q9H3Q1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42EP4Q9H3Q1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.94■■□□□ 1.42
CDC42EP4Q9H3Q1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42EP4Q9H3Q1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42EP4Q9H3Q1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CDC42EP4Q9H3Q1 AL157400.5-201ENST00000507624 621 ntBASIC23.92■■□□□ 1.42
CDC42EP4Q9H3Q1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
CDC42EP4Q9H3Q1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.92■■□□□ 1.42
CDC42EP4Q9H3Q1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CDC42EP4Q9H3Q1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CDC42EP4Q9H3Q1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42EP4Q9H3Q1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms