Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
CLPBQ9H078 LONRF2P2-201ENST00000439212 571 ntBASIC23.68■■□□□ 1.38
CLPBQ9H078 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLPBQ9H078 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLPBQ9H078 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLPBQ9H078 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLPBQ9H078 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLPBQ9H078 AC020928.2-201ENST00000588717 2197 ntBASIC23.68■■□□□ 1.38
CLPBQ9H078 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
CLPBQ9H078 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLPBQ9H078 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLPBQ9H078 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLPBQ9H078 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.67■■□□□ 1.38
CLPBQ9H078 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLPBQ9H078 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CLPBQ9H078 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLPBQ9H078 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLPBQ9H078 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLPBQ9H078 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLPBQ9H078 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLPBQ9H078 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLPBQ9H078 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLPBQ9H078 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.66■■□□□ 1.38
CLPBQ9H078 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLPBQ9H078 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.65■■□□□ 1.38
CLPBQ9H078 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLPBQ9H078 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.65■■□□□ 1.38
CLPBQ9H078 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CLPBQ9H078 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLPBQ9H078 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLPBQ9H078 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLPBQ9H078 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLPBQ9H078 KRT18P10-201ENST00000388836 1287 ntBASIC23.64■■□□□ 1.37
CLPBQ9H078 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CLPBQ9H078 AL031848.2-201ENST00000607670 837 ntBASIC23.64■■□□□ 1.37
CLPBQ9H078 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CLPBQ9H078 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLPBQ9H078 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLPBQ9H078 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CLPBQ9H078 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CLPBQ9H078 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLPBQ9H078 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLPBQ9H078 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLPBQ9H078 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLPBQ9H078 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CLPBQ9H078 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.63■■□□□ 1.37
CLPBQ9H078 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLPBQ9H078 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLPBQ9H078 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLPBQ9H078 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLPBQ9H078 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLPBQ9H078 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLPBQ9H078 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.62■■□□□ 1.37
CLPBQ9H078 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.62■■□□□ 1.37
CLPBQ9H078 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLPBQ9H078 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.61■■□□□ 1.37
CLPBQ9H078 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.61■■□□□ 1.37
CLPBQ9H078 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CLPBQ9H078 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLPBQ9H078 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLPBQ9H078 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CLPBQ9H078 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLPBQ9H078 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLPBQ9H078 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.6■■□□□ 1.37
CLPBQ9H078 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CLPBQ9H078 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CLPBQ9H078 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLPBQ9H078 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLPBQ9H078 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.59■■□□□ 1.37
CLPBQ9H078 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.59■■□□□ 1.37
CLPBQ9H078 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.59■■□□□ 1.37
CLPBQ9H078 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLPBQ9H078 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CLPBQ9H078 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.58■■□□□ 1.37
CLPBQ9H078 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.58■■□□□ 1.37
CLPBQ9H078 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.58■■□□□ 1.37
CLPBQ9H078 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLPBQ9H078 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLPBQ9H078 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLPBQ9H078 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLPBQ9H078 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.57■■□□□ 1.36
CLPBQ9H078 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.57■■□□□ 1.36
CLPBQ9H078 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLPBQ9H078 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CLPBQ9H078 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLPBQ9H078 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLPBQ9H078 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.57■■□□□ 1.36
CLPBQ9H078 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLPBQ9H078 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLPBQ9H078 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.56■■□□□ 1.36
CLPBQ9H078 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.56■■□□□ 1.36
CLPBQ9H078 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLPBQ9H078 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CLPBQ9H078 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.56■■□□□ 1.36
CLPBQ9H078 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.56■■□□□ 1.36
CLPBQ9H078 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLPBQ9H078 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CLPBQ9H078 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLPBQ9H078 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLPBQ9H078 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms