Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.28■■■□□ 2.12
CRNKL1Q9BZJ0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
CRNKL1Q9BZJ0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CRNKL1Q9BZJ0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CRNKL1Q9BZJ0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.27■■■□□ 2.12
CRNKL1Q9BZJ0 Z92544.1-202ENST00000571933 1220 ntBASIC28.27■■■□□ 2.12
CRNKL1Q9BZJ0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.27■■■□□ 2.12
CRNKL1Q9BZJ0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
CRNKL1Q9BZJ0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
CRNKL1Q9BZJ0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.26■■■□□ 2.11
CRNKL1Q9BZJ0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CRNKL1Q9BZJ0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CRNKL1Q9BZJ0 AC239859.2-201ENST00000444165 318 ntBASIC28.26■■■□□ 2.11
CRNKL1Q9BZJ0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.26■■■□□ 2.11
CRNKL1Q9BZJ0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CRNKL1Q9BZJ0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CRNKL1Q9BZJ0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.26■■■□□ 2.11
CRNKL1Q9BZJ0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CRNKL1Q9BZJ0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CRNKL1Q9BZJ0 DUSP8P4-201ENST00000399538 1761 ntBASIC28.25■■■□□ 2.11
CRNKL1Q9BZJ0 AC091060.1-201ENST00000623524 1766 ntBASIC28.25■■■□□ 2.11
CRNKL1Q9BZJ0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CRNKL1Q9BZJ0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
CRNKL1Q9BZJ0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CRNKL1Q9BZJ0 AC011551.1-201ENST00000614101 683 ntBASIC28.25■■■□□ 2.11
CRNKL1Q9BZJ0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.24■■■□□ 2.11
CRNKL1Q9BZJ0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CRNKL1Q9BZJ0 GUSBP5-201ENST00000418136 578 ntBASIC28.24■■■□□ 2.11
CRNKL1Q9BZJ0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.24■■■□□ 2.11
CRNKL1Q9BZJ0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CRNKL1Q9BZJ0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.24■■■□□ 2.11
CRNKL1Q9BZJ0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CRNKL1Q9BZJ0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
CRNKL1Q9BZJ0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
CRNKL1Q9BZJ0 BX664725.1-201ENST00000438252 379 ntBASIC28.23■■■□□ 2.11
CRNKL1Q9BZJ0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.23■■■□□ 2.11
CRNKL1Q9BZJ0 MIR4281-201ENST00000580852 62 ntBASIC28.23■■■□□ 2.11
CRNKL1Q9BZJ0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CRNKL1Q9BZJ0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CRNKL1Q9BZJ0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.22■■■□□ 2.11
CRNKL1Q9BZJ0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CRNKL1Q9BZJ0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CRNKL1Q9BZJ0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CRNKL1Q9BZJ0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.22■■■□□ 2.11
CRNKL1Q9BZJ0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CRNKL1Q9BZJ0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.21■■■□□ 2.11
CRNKL1Q9BZJ0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CRNKL1Q9BZJ0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.2■■■□□ 2.11
CRNKL1Q9BZJ0 AC145676.1-201ENST00000514988 2004 ntBASIC28.2■■■□□ 2.11
CRNKL1Q9BZJ0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.2■■■□□ 2.1
CRNKL1Q9BZJ0 AC137630.3-201ENST00000607245 391 ntBASIC28.2■■■□□ 2.1
CRNKL1Q9BZJ0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CRNKL1Q9BZJ0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CRNKL1Q9BZJ0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.2■■■□□ 2.1
CRNKL1Q9BZJ0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.19■■■□□ 2.1
CRNKL1Q9BZJ0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CRNKL1Q9BZJ0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.19■■■□□ 2.1
CRNKL1Q9BZJ0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CRNKL1Q9BZJ0 KRT125P-201ENST00000546827 989 ntBASIC28.19■■■□□ 2.1
CRNKL1Q9BZJ0 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.19■■■□□ 2.1
CRNKL1Q9BZJ0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CRNKL1Q9BZJ0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CRNKL1Q9BZJ0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CRNKL1Q9BZJ0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.18■■■□□ 2.1
CRNKL1Q9BZJ0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.18■■■□□ 2.1
CRNKL1Q9BZJ0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CRNKL1Q9BZJ0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.17■■■□□ 2.1
CRNKL1Q9BZJ0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CRNKL1Q9BZJ0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CRNKL1Q9BZJ0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
CRNKL1Q9BZJ0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CRNKL1Q9BZJ0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CRNKL1Q9BZJ0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
CRNKL1Q9BZJ0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.16■■■□□ 2.1
CRNKL1Q9BZJ0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.16■■■□□ 2.1
CRNKL1Q9BZJ0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.16■■■□□ 2.1
CRNKL1Q9BZJ0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
CRNKL1Q9BZJ0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CRNKL1Q9BZJ0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.15■■■□□ 2.1
CRNKL1Q9BZJ0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.15■■■□□ 2.1
CRNKL1Q9BZJ0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CRNKL1Q9BZJ0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CRNKL1Q9BZJ0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CRNKL1Q9BZJ0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.14■■■□□ 2.1
CRNKL1Q9BZJ0 MIR4787-201ENST00000607364 84 ntBASIC28.14■■■□□ 2.1
CRNKL1Q9BZJ0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
CRNKL1Q9BZJ0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
CRNKL1Q9BZJ0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CRNKL1Q9BZJ0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CRNKL1Q9BZJ0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.13■■■□□ 2.09
CRNKL1Q9BZJ0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CRNKL1Q9BZJ0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.13■■■□□ 2.09
CRNKL1Q9BZJ0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CRNKL1Q9BZJ0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CRNKL1Q9BZJ0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.12■■■□□ 2.09
CRNKL1Q9BZJ0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CRNKL1Q9BZJ0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CRNKL1Q9BZJ0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.12■■■□□ 2.09
CRNKL1Q9BZJ0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CRNKL1Q9BZJ0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms