Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
CFAP53Q96M91 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
CFAP53Q96M91 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.72■■■□□ 2.67
CFAP53Q96M91 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CFAP53Q96M91 AL031848.2-201ENST00000607670 837 ntBASIC31.72■■■□□ 2.67
CFAP53Q96M91 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CFAP53Q96M91 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CFAP53Q96M91 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.71■■■□□ 2.67
CFAP53Q96M91 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.71■■■□□ 2.67
CFAP53Q96M91 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CFAP53Q96M91 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.71■■■□□ 2.67
CFAP53Q96M91 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CFAP53Q96M91 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CFAP53Q96M91 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.7■■■□□ 2.67
CFAP53Q96M91 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
CFAP53Q96M91 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CFAP53Q96M91 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.66
CFAP53Q96M91 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CFAP53Q96M91 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CFAP53Q96M91 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CFAP53Q96M91 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CFAP53Q96M91 KRT18P24-201ENST00000344739 1156 ntBASIC31.68■■■□□ 2.66
CFAP53Q96M91 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CFAP53Q96M91 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.68■■■□□ 2.66
CFAP53Q96M91 AL451085.2-201ENST00000605085 799 ntBASIC31.68■■■□□ 2.66
CFAP53Q96M91 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.68■■■□□ 2.66
CFAP53Q96M91 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CFAP53Q96M91 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.67■■■□□ 2.66
CFAP53Q96M91 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.66■■■□□ 2.66
CFAP53Q96M91 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFAP53Q96M91 THA1P-201ENST00000590384 1145 ntBASIC31.66■■■□□ 2.66
CFAP53Q96M91 AC120024.1-201ENST00000562672 995 ntBASIC31.65■■■□□ 2.66
CFAP53Q96M91 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.65■■■□□ 2.66
CFAP53Q96M91 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.65■■■□□ 2.66
CFAP53Q96M91 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP53Q96M91 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP53Q96M91 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP53Q96M91 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
CFAP53Q96M91 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.64■■■□□ 2.65
CFAP53Q96M91 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.63■■■□□ 2.65
CFAP53Q96M91 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CFAP53Q96M91 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CFAP53Q96M91 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
CFAP53Q96M91 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.62■■■□□ 2.65
CFAP53Q96M91 AC011551.1-201ENST00000614101 683 ntBASIC31.62■■■□□ 2.65
CFAP53Q96M91 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP53Q96M91 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CFAP53Q96M91 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFAP53Q96M91 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.6■■■□□ 2.65
CFAP53Q96M91 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.6■■■□□ 2.65
CFAP53Q96M91 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFAP53Q96M91 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CFAP53Q96M91 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.6■■■□□ 2.65
CFAP53Q96M91 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFAP53Q96M91 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFAP53Q96M91 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFAP53Q96M91 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
CFAP53Q96M91 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFAP53Q96M91 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CFAP53Q96M91 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFAP53Q96M91 SLC6A10P-202ENST00000431994 2058 ntBASIC31.58■■■□□ 2.65
CFAP53Q96M91 AC009299.2-201ENST00000482477 511 ntBASIC31.58■■■□□ 2.65
CFAP53Q96M91 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.57■■■□□ 2.65
CFAP53Q96M91 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CFAP53Q96M91 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CFAP53Q96M91 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CFAP53Q96M91 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.57■■■□□ 2.64
CFAP53Q96M91 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.57■■■□□ 2.64
CFAP53Q96M91 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CFAP53Q96M91 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CFAP53Q96M91 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFAP53Q96M91 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFAP53Q96M91 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
CFAP53Q96M91 AL035685.1-201ENST00000636663 812 ntBASIC31.56■■■□□ 2.64
CFAP53Q96M91 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC31.56■■■□□ 2.64
CFAP53Q96M91 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.56■■■□□ 2.64
CFAP53Q96M91 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFAP53Q96M91 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.55■■■□□ 2.64
CFAP53Q96M91 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CFAP53Q96M91 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.54■■■□□ 2.64
CFAP53Q96M91 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.54■■■□□ 2.64
CFAP53Q96M91 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.54■■■□□ 2.64
CFAP53Q96M91 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
CFAP53Q96M91 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP53Q96M91 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP53Q96M91 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP53Q96M91 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP53Q96M91 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP53Q96M91 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP53Q96M91 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP53Q96M91 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
CFAP53Q96M91 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.52■■■□□ 2.64
CFAP53Q96M91 AC090877.2-201ENST00000558441 1738 ntBASIC31.52■■■□□ 2.64
CFAP53Q96M91 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CFAP53Q96M91 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CFAP53Q96M91 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CFAP53Q96M91 MIR4281-201ENST00000580852 62 ntBASIC31.51■■■□□ 2.63
CFAP53Q96M91 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
CFAP53Q96M91 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.51■■■□□ 2.63
CFAP53Q96M91 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms