Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMD4Q96H15 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMD4Q96H15 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TIMD4Q96H15 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMD4Q96H15 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMD4Q96H15 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMD4Q96H15 AC239859.2-201ENST00000444165 318 ntBASIC19.82■□□□□ 0.76
TIMD4Q96H15 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
TIMD4Q96H15 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMD4Q96H15 FOXO3B-201ENST00000395675 1928 ntBASIC19.82■□□□□ 0.76
TIMD4Q96H15 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMD4Q96H15 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
TIMD4Q96H15 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMD4Q96H15 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMD4Q96H15 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TIMD4Q96H15 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.81■□□□□ 0.76
TIMD4Q96H15 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TIMD4Q96H15 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
TIMD4Q96H15 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.81■□□□□ 0.76
TIMD4Q96H15 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TIMD4Q96H15 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.81■□□□□ 0.76
TIMD4Q96H15 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TIMD4Q96H15 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMD4Q96H15 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMD4Q96H15 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMD4Q96H15 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.8■□□□□ 0.76
TIMD4Q96H15 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.8■□□□□ 0.76
TIMD4Q96H15 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TIMD4Q96H15 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TIMD4Q96H15 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMD4Q96H15 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
TIMD4Q96H15 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.79■□□□□ 0.76
TIMD4Q96H15 AC096887.2-201ENST00000623443 1957 ntBASIC19.79■□□□□ 0.76
TIMD4Q96H15 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMD4Q96H15 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.79■□□□□ 0.76
TIMD4Q96H15 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMD4Q96H15 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMD4Q96H15 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.79■□□□□ 0.76
TIMD4Q96H15 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.79■□□□□ 0.76
TIMD4Q96H15 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMD4Q96H15 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMD4Q96H15 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.78■□□□□ 0.76
TIMD4Q96H15 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMD4Q96H15 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TIMD4Q96H15 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TIMD4Q96H15 GUSBP5-201ENST00000418136 578 ntBASIC19.78■□□□□ 0.76
TIMD4Q96H15 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TIMD4Q96H15 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMD4Q96H15 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMD4Q96H15 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMD4Q96H15 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TIMD4Q96H15 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TIMD4Q96H15 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TIMD4Q96H15 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.77■□□□□ 0.76
TIMD4Q96H15 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TIMD4Q96H15 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMD4Q96H15 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TIMD4Q96H15 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMD4Q96H15 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TIMD4Q96H15 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.76■□□□□ 0.75
TIMD4Q96H15 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMD4Q96H15 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMD4Q96H15 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TIMD4Q96H15 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.76■□□□□ 0.75
TIMD4Q96H15 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.76■□□□□ 0.75
TIMD4Q96H15 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMD4Q96H15 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMD4Q96H15 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TIMD4Q96H15 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TIMD4Q96H15 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TIMD4Q96H15 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TIMD4Q96H15 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TIMD4Q96H15 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TIMD4Q96H15 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TIMD4Q96H15 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TIMD4Q96H15 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TIMD4Q96H15 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.75■□□□□ 0.75
TIMD4Q96H15 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TIMD4Q96H15 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.75■□□□□ 0.75
TIMD4Q96H15 MIR4281-201ENST00000580852 62 ntBASIC19.75■□□□□ 0.75
TIMD4Q96H15 AC137630.3-201ENST00000607245 391 ntBASIC19.75■□□□□ 0.75
TIMD4Q96H15 MIR4787-201ENST00000607364 84 ntBASIC19.75■□□□□ 0.75
TIMD4Q96H15 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TIMD4Q96H15 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.75■□□□□ 0.75
TIMD4Q96H15 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TIMD4Q96H15 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TIMD4Q96H15 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMD4Q96H15 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMD4Q96H15 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
TIMD4Q96H15 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMD4Q96H15 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.74■□□□□ 0.75
TIMD4Q96H15 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.74■□□□□ 0.75
TIMD4Q96H15 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TIMD4Q96H15 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TIMD4Q96H15 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TIMD4Q96H15 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TIMD4Q96H15 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TIMD4Q96H15 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TIMD4Q96H15 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.73■□□□□ 0.75
TIMD4Q96H15 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms