Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMARCC1Q92922 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCC1Q92922 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
SMARCC1Q92922 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCC1Q92922 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCC1Q92922 AC106739.1-201ENST00000617035 715 ntBASIC30.64■■■□□ 2.5
SMARCC1Q92922 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMARCC1Q92922 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCC1Q92922 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCC1Q92922 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.63■■■□□ 2.49
SMARCC1Q92922 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SMARCC1Q92922 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCC1Q92922 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMARCC1Q92922 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCC1Q92922 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMARCC1Q92922 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.62■■■□□ 2.49
SMARCC1Q92922 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.62■■■□□ 2.49
SMARCC1Q92922 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
SMARCC1Q92922 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCC1Q92922 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30.61■■■□□ 2.49
SMARCC1Q92922 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMARCC1Q92922 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
SMARCC1Q92922 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCC1Q92922 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.6■■■□□ 2.49
SMARCC1Q92922 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCC1Q92922 PBX2P1-201ENST00000493219 1291 ntBASIC30.6■■■□□ 2.49
SMARCC1Q92922 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SMARCC1Q92922 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.6■■■□□ 2.49
SMARCC1Q92922 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.59■■■□□ 2.49
SMARCC1Q92922 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.59■■■□□ 2.49
SMARCC1Q92922 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMARCC1Q92922 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.59■■■□□ 2.49
SMARCC1Q92922 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.59■■■□□ 2.49
SMARCC1Q92922 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
SMARCC1Q92922 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCC1Q92922 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMARCC1Q92922 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
SMARCC1Q92922 ZNRF2P3-201ENST00000424200 374 ntBASIC30.58■■■□□ 2.49
SMARCC1Q92922 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCC1Q92922 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMARCC1Q92922 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.57■■■□□ 2.48
SMARCC1Q92922 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.56■■■□□ 2.48
SMARCC1Q92922 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.56■■■□□ 2.48
SMARCC1Q92922 AC142381.2-201ENST00000566120 298 ntBASIC30.56■■■□□ 2.48
SMARCC1Q92922 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
SMARCC1Q92922 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.55■■■□□ 2.48
SMARCC1Q92922 MIR6722-201ENST00000617286 78 ntBASIC30.55■■■□□ 2.48
SMARCC1Q92922 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SMARCC1Q92922 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCC1Q92922 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.54■■■□□ 2.48
SMARCC1Q92922 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCC1Q92922 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCC1Q92922 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCC1Q92922 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.54■■■□□ 2.48
SMARCC1Q92922 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.54■■■□□ 2.48
SMARCC1Q92922 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.54■■■□□ 2.48
SMARCC1Q92922 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.54■■■□□ 2.48
SMARCC1Q92922 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCC1Q92922 RARRES2P6-201ENST00000567333 442 ntBASIC30.54■■■□□ 2.48
SMARCC1Q92922 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.54■■■□□ 2.48
SMARCC1Q92922 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.54■■■□□ 2.48
SMARCC1Q92922 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SMARCC1Q92922 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SMARCC1Q92922 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SMARCC1Q92922 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SMARCC1Q92922 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SMARCC1Q92922 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.52■■■□□ 2.48
SMARCC1Q92922 SNX5-217ENST00000606557 1087 ntBASIC30.52■■■□□ 2.48
SMARCC1Q92922 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SMARCC1Q92922 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.52■■■□□ 2.48
SMARCC1Q92922 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
SMARCC1Q92922 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMARCC1Q92922 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
SMARCC1Q92922 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SMARCC1Q92922 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMARCC1Q92922 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.5■■■□□ 2.47
SMARCC1Q92922 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCC1Q92922 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCC1Q92922 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCC1Q92922 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.5■■■□□ 2.47
SMARCC1Q92922 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCC1Q92922 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCC1Q92922 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
SMARCC1Q92922 FOXO3B-201ENST00000395675 1928 ntBASIC30.49■■■□□ 2.47
SMARCC1Q92922 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCC1Q92922 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
SMARCC1Q92922 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.49■■■□□ 2.47
SMARCC1Q92922 UNC93B3-201ENST00000308076 687 ntBASIC30.49■■■□□ 2.47
SMARCC1Q92922 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.49■■■□□ 2.47
SMARCC1Q92922 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.49■■■□□ 2.47
SMARCC1Q92922 AC139426.1-201ENST00000568218 2529 ntBASIC30.48■■■□□ 2.47
SMARCC1Q92922 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
SMARCC1Q92922 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCC1Q92922 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.48■■■□□ 2.47
SMARCC1Q92922 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCC1Q92922 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCC1Q92922 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMARCC1Q92922 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
SMARCC1Q92922 SUDS3P1-201ENST00000505831 966 ntBASIC30.47■■■□□ 2.47
SMARCC1Q92922 AL031432.3-201ENST00000607698 485 ntBASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms