Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
RPGRQ92834 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RPGRQ92834 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RPGRQ92834 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RPGRQ92834 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RPGRQ92834 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.47■■■□□ 2.31
RPGRQ92834 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.47■■■□□ 2.31
RPGRQ92834 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.47■■■□□ 2.31
RPGRQ92834 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.47■■■□□ 2.31
RPGRQ92834 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.47■■■□□ 2.31
RPGRQ92834 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC29.47■■■□□ 2.31
RPGRQ92834 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.47■■■□□ 2.31
RPGRQ92834 MIR4466-201ENST00000606121 54 ntBASIC29.47■■■□□ 2.31
RPGRQ92834 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.47■■■□□ 2.31
RPGRQ92834 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RPGRQ92834 AC096631.2-201ENST00000436136 790 ntBASIC29.46■■■□□ 2.31
RPGRQ92834 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.46■■■□□ 2.31
RPGRQ92834 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RPGRQ92834 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RPGRQ92834 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RPGRQ92834 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RPGRQ92834 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RPGRQ92834 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
RPGRQ92834 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.45■■■□□ 2.3
RPGRQ92834 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RPGRQ92834 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
RPGRQ92834 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
RPGRQ92834 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
RPGRQ92834 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RPGRQ92834 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.43■■■□□ 2.3
RPGRQ92834 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RPGRQ92834 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.42■■■□□ 2.3
RPGRQ92834 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RPGRQ92834 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.42■■■□□ 2.3
RPGRQ92834 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RPGRQ92834 AF131216.4-201ENST00000638924 1588 ntBASIC29.42■■■□□ 2.3
RPGRQ92834 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RPGRQ92834 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RPGRQ92834 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RPGRQ92834 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.41■■■□□ 2.3
RPGRQ92834 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RPGRQ92834 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.41■■■□□ 2.3
RPGRQ92834 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.41■■■□□ 2.3
RPGRQ92834 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
RPGRQ92834 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RPGRQ92834 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RPGRQ92834 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RPGRQ92834 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RPGRQ92834 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RPGRQ92834 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.39■■■□□ 2.3
RPGRQ92834 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.39■■■□□ 2.3
RPGRQ92834 QDPR-206ENST00000508623 601 ntTSL 3 BASIC29.39■■■□□ 2.3
RPGRQ92834 AL512631.2-201ENST00000604634 923 ntBASIC29.39■■■□□ 2.3
RPGRQ92834 AC005837.3-201ENST00000612163 286 ntBASIC29.39■■■□□ 2.3
RPGRQ92834 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
RPGRQ92834 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RPGRQ92834 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
RPGRQ92834 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RPGRQ92834 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RPGRQ92834 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RPGRQ92834 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.37■■■□□ 2.29
RPGRQ92834 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.36■■■□□ 2.29
RPGRQ92834 FOXO3B-201ENST00000395675 1928 ntBASIC29.36■■■□□ 2.29
RPGRQ92834 AC142086.6-201ENST00000621154 1765 ntBASIC29.36■■■□□ 2.29
RPGRQ92834 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RPGRQ92834 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
RPGRQ92834 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RPGRQ92834 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC29.34■■■□□ 2.29
RPGRQ92834 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RPGRQ92834 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RPGRQ92834 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.32■■■□□ 2.28
RPGRQ92834 TFPT-201ENST00000391757 774 ntTSL 5 BASIC29.32■■■□□ 2.28
RPGRQ92834 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
RPGRQ92834 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RPGRQ92834 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC29.32■■■□□ 2.28
RPGRQ92834 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.32■■■□□ 2.28
RPGRQ92834 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.32■■■□□ 2.28
RPGRQ92834 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
RPGRQ92834 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RPGRQ92834 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RPGRQ92834 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.31■■■□□ 2.28
RPGRQ92834 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.31■■■□□ 2.28
RPGRQ92834 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RPGRQ92834 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.31■■■□□ 2.28
RPGRQ92834 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RPGRQ92834 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RPGRQ92834 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.3■■■□□ 2.28
RPGRQ92834 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RPGRQ92834 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.29■■■□□ 2.28
RPGRQ92834 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.29■■■□□ 2.28
RPGRQ92834 AC133561.4-201ENST00000566112 224 ntBASIC29.29■■■□□ 2.28
RPGRQ92834 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RPGRQ92834 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RPGRQ92834 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RPGRQ92834 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
RPGRQ92834 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.29■■■□□ 2.28
RPGRQ92834 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
RPGRQ92834 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RPGRQ92834 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RPGRQ92834 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms