Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRUB1Q8WWH5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRUB1Q8WWH5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRUB1Q8WWH5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
TRUB1Q8WWH5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.52■■□□□ 1.03
TRUB1Q8WWH5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 LINC01971-201ENST00000617888 1048 ntBASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRUB1Q8WWH5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 DUX4L13-201ENST00000554103 1267 ntBASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 DUX4L15-201ENST00000611059 1267 ntBASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 DUX4L23-201ENST00000615195 1269 ntBASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 DUX4L24-201ENST00000617576 1269 ntBASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 DUX4L22-201ENST00000618238 1269 ntBASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 DUX4L20-201ENST00000619712 1269 ntBASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 DUX4L21-201ENST00000622058 1269 ntBASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 DUX4L10-201ENST00000622460 1267 ntBASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 DUX4L25-201ENST00000624915 1269 ntBASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRUB1Q8WWH5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TRUB1Q8WWH5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRUB1Q8WWH5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRUB1Q8WWH5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.49■■□□□ 1.03
TRUB1Q8WWH5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.49■■□□□ 1.03
TRUB1Q8WWH5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRUB1Q8WWH5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRUB1Q8WWH5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRUB1Q8WWH5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 AL117328.2-201ENST00000624617 1940 ntBASIC21.47■■□□□ 1.03
TRUB1Q8WWH5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.46■■□□□ 1.03
TRUB1Q8WWH5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.45■■□□□ 1.02
TRUB1Q8WWH5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms