Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF138Q8WVD3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF138Q8WVD3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF138Q8WVD3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF138Q8WVD3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF138Q8WVD3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.58■■□□□ 1.04
RNF138Q8WVD3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF138Q8WVD3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF138Q8WVD3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF138Q8WVD3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF138Q8WVD3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.57■■□□□ 1.04
RNF138Q8WVD3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF138Q8WVD3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.57■■□□□ 1.04
RNF138Q8WVD3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF138Q8WVD3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF138Q8WVD3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF138Q8WVD3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF138Q8WVD3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF138Q8WVD3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF138Q8WVD3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF138Q8WVD3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF138Q8WVD3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF138Q8WVD3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF138Q8WVD3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF138Q8WVD3 MIR6089-201ENST00000616698 64 ntBASIC21.55■■□□□ 1.04
RNF138Q8WVD3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RNF138Q8WVD3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF138Q8WVD3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF138Q8WVD3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.54■■□□□ 1.04
RNF138Q8WVD3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF138Q8WVD3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
RNF138Q8WVD3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF138Q8WVD3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF138Q8WVD3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF138Q8WVD3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF138Q8WVD3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF138Q8WVD3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF138Q8WVD3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF138Q8WVD3 RARRES2P1-201ENST00000474487 481 ntBASIC21.53■■□□□ 1.04
RNF138Q8WVD3 AC103724.3-201ENST00000564481 992 ntBASIC21.53■■□□□ 1.04
RNF138Q8WVD3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF138Q8WVD3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF138Q8WVD3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RNF138Q8WVD3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF138Q8WVD3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF138Q8WVD3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RNF138Q8WVD3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF138Q8WVD3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
RNF138Q8WVD3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF138Q8WVD3 KRT18P24-201ENST00000344739 1156 ntBASIC21.52■■□□□ 1.04
RNF138Q8WVD3 AC011551.1-201ENST00000614101 683 ntBASIC21.52■■□□□ 1.04
RNF138Q8WVD3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RNF138Q8WVD3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF138Q8WVD3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF138Q8WVD3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF138Q8WVD3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF138Q8WVD3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF138Q8WVD3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF138Q8WVD3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF138Q8WVD3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF138Q8WVD3 KRT8P33-201ENST00000508125 1423 ntBASIC21.5■■□□□ 1.03
RNF138Q8WVD3 YBX1P4-201ENST00000392794 808 ntBASIC21.5■■□□□ 1.03
RNF138Q8WVD3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF138Q8WVD3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF138Q8WVD3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF138Q8WVD3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF138Q8WVD3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF138Q8WVD3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF138Q8WVD3 AC020928.2-201ENST00000588717 2197 ntBASIC21.49■■□□□ 1.03
RNF138Q8WVD3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF138Q8WVD3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RNF138Q8WVD3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF138Q8WVD3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF138Q8WVD3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF138Q8WVD3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF138Q8WVD3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF138Q8WVD3 AC120024.1-201ENST00000562672 995 ntBASIC21.48■■□□□ 1.03
RNF138Q8WVD3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF138Q8WVD3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF138Q8WVD3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF138Q8WVD3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF138Q8WVD3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RNF138Q8WVD3 AC090877.2-201ENST00000558441 1738 ntBASIC21.47■■□□□ 1.03
RNF138Q8WVD3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF138Q8WVD3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF138Q8WVD3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF138Q8WVD3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF138Q8WVD3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF138Q8WVD3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF138Q8WVD3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RNF138Q8WVD3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms